Other packages > Find by keyword >

POMS  

Phylogenetic Organization of Metagenomic Signals
View on CRAN: Click here


Download and install POMS package within the R console
Install from CRAN:
install.packages("POMS")

Install from Github:
library("remotes")
install_github("cran/POMS")

Install by package version:
library("remotes")
install_version("POMS", "1.0.1")



Attach the package and use:
library("POMS")
Maintained by
Gavin Douglas
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-12-14
Latest Update: 2022-12-14
Description:
Code to identify functional enrichments across diverse taxa in phylogenetic tree, particularly where these taxa differ in abundance across samples in a non-random pattern. The motivation for this approach is to identify microbial functions encoded by diverse taxa that are at higher abundance in certain samples compared to others, which could indicate that such functions are broadly adaptive under certain conditions. See 'GitHub' repository for tutorial and examples: . Citation: Gavin M. Douglas, Molly G. Hayes, Morgan G. I. Langille, Elhanan Borenstein (2022) .
How to cite:
Gavin Douglas (2022). POMS: Phylogenetic Organization of Metagenomic Signals. R package version 1.0.1, https://cran.r-project.org/web/packages/POMS. Accessed 28 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited POMS R package
View POMS citation profile
Other R packages that POMS depends, imports, suggests or enhances
Complete documentation for POMS
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

cats  
Cohort Platform Trial Simulation
Cohort plAtform Trial Simulation whereby every cohort consists of two arms, control and experimenta ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ncdf4  
Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
Provides a high-level R interface to data files written using Unidata's netCDF library (version 4 or ...
Download / Learn more Package Citations See dependency  
NPHazardRate  
Nonparametric Hazard Rate Estimation
Provides functions and examples for histogram, kernel (classical, variable bandwidth and transformat ...
Download / Learn more Package Citations See dependency  
msamp  
Estimate Sample Size to Detect Bacterial Contamination in a Product Lot
Estimates the sample size needed to detect microbial contamination in a lot with a user-specified d ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA