Other packages > Find by keyword >

PLEXI  

Multiplex Network Analysis
View on CRAN: Click here


Download and install PLEXI package within the R console
Install from CRAN:
install.packages("PLEXI")

Install from Github:
library("remotes")
install_github("cran/PLEXI")

Install by package version:
library("remotes")
install_version("PLEXI", "1.0.0")



Attach the package and use:
library("PLEXI")
Maintained by
Behnam Yousefi
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-08-09
Latest Update: 2023-08-09
Description:
Interactions between different biological entities are crucial for the function of biological systems. In such networks, nodes represent biological elements, such as genes, proteins and microbes, and their interactions can be defined by edges, which can be either binary or weighted. The dysregulation of these networks can be associated with different clinical conditions such as diseases and response to treatments. However, such variations often occur locally and do not concern the whole network. To capture local variations of such networks, we propose multiplex network differential analysis (MNDA). MNDA allows to quantify the variations in the local neighborhood of each node (e.g. gene) between the two given clinical states, and to test for statistical significance of such variation. Yousefi et al. (2023) .
How to cite:
Behnam Yousefi (2023). PLEXI: Multiplex Network Analysis. R package version 1.0.0, https://cran.r-project.org/web/packages/PLEXI. Accessed 29 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited PLEXI R package
View PLEXI citation profile
Other R packages that PLEXI depends, imports, suggests or enhances
Complete documentation for PLEXI
Functions, R codes and Examples using the PLEXI R package
Full PLEXI package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

GEVcdn  
GEV Conditional Density Estimation Network
Implements a flexible nonlinear modelling framework for nonstationary generalized extreme value anal ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
personalized2part  
Two-Part Estimation of Treatment Rules for Semi-Continuous Data
Implements the methodology of Huling, Smith, and Chen (2020) , w ...
Download / Learn more Package Citations See dependency  
binovisualfields  
Depth-Dependent Binocular Visual Fields Simulation
Simulation and visualization depth-dependent integrated visual fields. Visual fields are measured mo ...
Download / Learn more Package Citations See dependency  
fastRG  
Sample Generalized Random Dot Product Graphs in Linear Time
Samples generalized random product graphs, a generalization of a broad class of network models. Giv ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA