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PCBS  

Principal Component BiSulfite
View on CRAN: Click here


Download and install PCBS package within the R console
Install from CRAN:
install.packages("PCBS")

Install from Github:
library("remotes")
install_github("cran/PCBS")

Install by package version:
library("remotes")
install_version("PCBS", "0.1.1")



Attach the package and use:
library("PCBS")
Maintained by
Kathryn Lande
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-04-23
Latest Update: 2024-04-23
Description:
A system for fast, accurate, and flexible whole genome bisulfite sequencing (WGBS) data analysis of two-condition comparisons. Principle Component BiSulfite, 'PCBS', assigns methylated loci eigenvector values from the treatment-delineating principal component in lieu of running millions of pairwise statistical tests, which dramatically increases analysis flexibility and reduces computational requirements. Methods: <https://katlande.github.io/PCBS/articles/Differential_Methylation.html>.
How to cite:
Kathryn Lande (2024). PCBS: Principal Component BiSulfite. R package version 0.1.1, https://cran.r-project.org/web/packages/PCBS. Accessed 07 Nov. 2024.
Previous versions and publish date:
0.1.0 (2024-04-23 11:00)
Other packages that cited PCBS R package
View PCBS citation profile
Other R packages that PCBS depends, imports, suggests or enhances
Complete documentation for PCBS
Functions, R codes and Examples using the PCBS R package
Full PCBS package functions and examples
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