Other packages > Find by keyword >

PANACEA  

Personalized Network-Based Anti-Cancer Therapy Evaluation
View on CRAN: Click here


Download and install PANACEA package within the R console
Install from CRAN:
install.packages("PANACEA")

Install from Github:
library("remotes")
install_github("cran/PANACEA")

Install by package version:
library("remotes")
install_version("PANACEA", "1.1.0")



Attach the package and use:
library("PANACEA")
Maintained by
Ege Ulgen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-05-02
Latest Update: 2023-08-19
Description:
Identification of the most appropriate pharmacotherapy for each patient based on genomic alterations is a major challenge in personalized oncology. 'PANACEA' is a collection of personalized anti-cancer drug prioritization approaches utilizing network methods. The methods utilize personalized "driverness" scores from 'driveR' to rank drugs, mapping these onto a protein-protein interaction network. The "distance-based" method scores each drug based on these scores and distances between drugs and genes to rank given drugs. The "RWR" method propagates these scores via a random-walk with restart framework to rank the drugs. The methods are described in detail in Ulgen E, Ozisik O, Sezerman OU. 2023. PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology. Bioinformatics .
How to cite:
Ege Ulgen (2023). PANACEA: Personalized Network-Based Anti-Cancer Therapy Evaluation. R package version 1.1.0, https://cran.r-project.org/web/packages/PANACEA. Accessed 24 Oct. 2026.
Previous versions and publish date:
(2026-07-09 08:15), 1.0.0 (2023-05-02 23:10), 1.0.1 (2023-08-19 15:22)
Other packages that cited PANACEA R package
View PANACEA citation profile
Other R packages that PANACEA depends, imports, suggests or enhances
Complete documentation for PANACEA
Functions, R codes and Examples using the PANACEA R package
Full PANACEA package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

givitiR  
The GiViTI Calibration Test and Belt
Functions to assess the calibration of logistic regression models with the GiViTI (Gruppo Italiano p ...
Download / Learn more Package Citations See dependency  
gemlog  
File Conversion for "Gem Infrasound Logger"
Reads data files from the 'Gem infrasound logger' for analysis and converts to segy format (which is ...
Download / Learn more Package Citations See dependency  
climwin  
Climate Window Analysis
Contains functions to detect and visualise periods of climate sensitivity (climate windows) for a g ...
Download / Learn more Package Citations See dependency  
FDRsampsize  
Compute Sample Size that Meets Requirements for Average Power and FDR
Defines a collection of functions to compute average power and sample size for studies that use the ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
forecastHybrid  
Convenient Functions for Ensemble Time Series Forecasts
Convenient functions for ensemble forecasts in R combining approaches from the 'forecast' package. ...
Download / Learn more Package Citations See dependency  

29,080

R Packages

247,686

Dependencies

77,281

Author Associations

29,081

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA