Other packages > Find by keyword >

PALMO  

Identify Intra and Inter-Donor Variations in Bulk or Single Cell Longitudinal Dataset
View on CRAN: Click here


Download and install PALMO package within the R console
Install from CRAN:
install.packages("PALMO")

Install from Github:
library("remotes")
install_github("cran/PALMO")

Install by package version:
library("remotes")
install_version("PALMO", "0.1.2")



Attach the package and use:
library("PALMO")
Maintained by
Suhas Vasaikar
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-05-13
Latest Update:
Description:
It is a platform for analyzing longitudinal data from bulk as well as single cell datasets. It allows to identify variations in molecular features within and across donors over longitudinal time points. The analysis can be done on bulk expression dataset without known cell type information or single cell with cell type/user-defined groups. It allows to infer stable and variable features in given donor and each cell type (or user defined group). The outlier analysis can be performed to identify technical/biological perturbed samples in donor/participant. Further, differential analysis can be performed to decipher time-wise changes in gene expression in a cell type.
How to cite:
Suhas Vasaikar (2022). PALMO: Identify Intra and Inter-Donor Variations in Bulk or Single Cell Longitudinal Dataset. R package version 0.1.2, https://cran.r-project.org/web/packages/PALMO. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.1.0 (2022-05-13 10:40), 0.1.1 (2022-06-01 02:10), 0.1.2 (2022-08-18 00:40)
Other packages that cited PALMO R package
View PALMO citation profile
Other R packages that PALMO depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  
foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA