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PACVr  

Plastome Assembly Coverage Visualization
View on CRAN: Click here


Download and install PACVr package within the R console
Install from CRAN:
install.packages("PACVr")

Install from Github:
library("remotes")
install_github("cran/PACVr")

Install by package version:
library("remotes")
install_version("PACVr", "1.0.11")



Attach the package and use:
library("PACVr")
Maintained by
Michael Gruenstaeudl
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-07-26
Latest Update: 2024-04-10
Description:
Visualizes the coverage depth of a complete plastid genome as well as the equality of its inverted repeat regions in relation to the circular, quadripartite genome structure and the location of individual genes. For more information, please see Gruenstaeudl and Jenke (2020) .
How to cite:
Michael Gruenstaeudl (2019). PACVr: Plastome Assembly Coverage Visualization. R package version 1.0.11, https://cran.r-project.org/web/packages/PACVr. Accessed 07 Mar. 2026.
Previous versions and publish date:
0.8.1 (2019-07-26 12:00), 0.8.2 (2019-09-13 18:20), 0.9.1 (2020-02-09 13:50), 0.9.2 (2020-02-21 01:10), 0.9.4 (2020-11-22 22:00), 1.0.5 (2023-12-08 12:20), 1.0.6 (2024-01-09 02:20), 1.0.7 (2024-02-05 19:10), 1.0.8 (2024-02-28 04:30)
Other packages that cited PACVr R package
View PACVr citation profile
Other R packages that PACVr depends, imports, suggests or enhances
Complete documentation for PACVr
Functions, R codes and Examples using the PACVr R package
Some associated functions: PACVr-package . PACVr.complete . RCircos.Env . 
Some associated R codes: PACVr.R . customizedRCircos.R . generatePlotData.R . helpers.R . parseData.R . visualizeWithRCircos.R . zzz.R .  Full PACVr package functions and examples
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