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OrgHeatmap  

Visualization Tool for Numerical Data on Human/Mouse Organs and Organelles
View on CRAN: Click here


Download and install OrgHeatmap package within the R console
Install from CRAN:
install.packages("OrgHeatmap")

Install from Github:
library("remotes")
install_github("cran/OrgHeatmap")

Install by package version:
library("remotes")
install_version("OrgHeatmap", "0.3.4")



Attach the package and use:
library("OrgHeatmap")
Maintained by
Qirui Shen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-09-22
Latest Update: 2025-09-22
Description:
A tool for visualizing numerical data (such as gene expression levels) on human organ maps. It supports custom color schemes, organ system filtering, and optional bar charts for quantitative comparison. The package integrates organ coordinate data to plot anatomical contours and map data values to specific organs, facilitating intuitive visualization of biological data distribution. The underlying method was described in the preprint by Zhou et al. (2022) <doi:10.1101/2022.09.07.506938>.
How to cite:
Qirui Shen (2025). OrgHeatmap: Visualization Tool for Numerical Data on Human/Mouse Organs and Organelles. R package version 0.3.4, https://cran.r-project.org/web/packages/OrgHeatmap. Accessed 25 Oct. 2026.
Previous versions and publish date:
0.1.2 (2025-09-22 10:10), 0.3.1 (2025-11-26 09:20), 0.3.2 (2025-12-11 08:20), 0.3.3 (2026-03-15 12:50), (2026-07-09 08:15)
Other packages that cited OrgHeatmap R package
View OrgHeatmap citation profile
Other R packages that OrgHeatmap depends, imports, suggests or enhances
Complete documentation for OrgHeatmap
Functions, R codes and Examples using the OrgHeatmap R package
Full OrgHeatmap package functions and examples
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