Other packages > Find by keyword >

OpEnHiMR  

Optimization Based Ensemble Model for Prediction of Histone Modifications in Rice
View on CRAN: Click here


Download and install OpEnHiMR package within the R console
Install from CRAN:
install.packages("OpEnHiMR")

Install from Github:
library("remotes")
install_github("cran/OpEnHiMR")

Install by package version:
library("remotes")
install_version("OpEnHiMR", "0.1.1")



Attach the package and use:
library("OpEnHiMR")
Maintained by
Dipro Sinha
[Scholar Profile | Author Map]
First Published: 2024-05-26
Latest Update: 2024-05-30
Description:
The comprehensive knowledge of epigenetic modifications in plants, encompassing histone modifications in regulating gene expression, is not completely ingrained. It is noteworthy that histone deacetylation and histone H3 lysine 27 trimethylation (H3K27me3) play a role in repressing transcription in eukaryotes. In contrast, histone acetylation (H3K9ac) and H3K4me3 have been inevitably linked to the stimulation of gene expression, which significantly influences plant development and plays a role in plant responses to biotic and abiotic stresses. To our knowledge this the first multiclass classifier for predicting histone modification in plants. <doi:10.1186/s12864-019-5489-4>.
How to cite:
Dipro Sinha (2024). OpEnHiMR: Optimization Based Ensemble Model for Prediction of Histone Modifications in Rice. R package version 0.1.1, https://cran.r-project.org/web/packages/OpEnHiMR. Accessed 20 Feb. 2025.
Previous versions and publish date:
0.1.0 (2024-05-26 19:30)
Other packages that cited OpEnHiMR R package
View OpEnHiMR citation profile
Other R packages that OpEnHiMR depends, imports, suggests or enhances
Complete documentation for OpEnHiMR
Functions, R codes and Examples using the OpEnHiMR R package
Full OpEnHiMR package functions and examples
Downloads during the last 30 days
01/2101/2201/2301/2401/2501/2601/2701/2801/2901/3001/3102/0102/0202/0302/0402/0502/0602/0702/0802/0902/1002/1102/1202/1302/1402/1502/1602/1702/1802/19Downloads for OpEnHiMR051015202530354045505560TrendBars
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

healthyR.ai  
The Machine Learning and AI Modeling Companion to 'healthyR'
Hospital machine learning and ai data analysis workflow tools, modeling, and automations. This li ...
Download / Learn more Package Citations See dependency  
reader  
Suite of Functions to Flexibly Read Data from Files
A set of functions to simplify reading data from files. The main function, reader(), should read mos ...
Download / Learn more Package Citations See dependency  
tigger  
Infers Novel Immunoglobulin Alleles from Sequencing Data
Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
multgee  
GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
GEE solver for correlated nominal or ordinal multinomial responses using a local odds ratios parame ...
Download / Learn more Package Citations See dependency  
CarletonStats  
Functions for Statistics Classes at Carleton College
Includes commands for bootstrapping and permutation tests, a command for created grouped bar plots, ...
Download / Learn more Package Citations See dependency  

23,712

R Packages

205,795

Dependencies

64,332

Author Associations

23,631

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA