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OmicNavigator
View on CRAN: Click
here
Download and install OmicNavigator package within the R console
Install from CRAN:
install.packages("OmicNavigator")
Install from Github:
library("remotes")
install_github("cran/OmicNavigator") Install by package version:
library("remotes")
install_version("OmicNavigator", "1.19.0") Attach the package and use:
library("OmicNavigator")
Maintained by
John Blischak
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-07-26
Latest Update: 2025-07-30
Description:
A tool for interactive exploration of the results from 'omics'
experiments to facilitate novel discoveries from high-throughput biology. The
software includes R functions for the 'bioinformatician' to deposit study
metadata and the outputs from statistical analyses (e.g. differential
expression, enrichment). These results are then exported to an interactive
JavaScript dashboard that can be interrogated on the user's local machine or
deployed online to be explored by collaborators. The dashboard includes
'sortable' tables, interactive plots including network visualization, and
fine-grained filtering based on statistical significance.
How to cite:
John Blischak (2021). OmicNavigator: Open-Source Software for 'Omic' Data Analysis and Visualization. R package version 1.19.0, https://cran.r-project.org/web/packages/OmicNavigator. Accessed 05 Jun. 2026.
Previous versions and publish date:
Other packages that cited OmicNavigator R package
View OmicNavigator citation profile
Other R packages that OmicNavigator depends,
imports, suggests or enhances
Complete documentation for OmicNavigator
Functions, R codes and Examples using
the OmicNavigator R package
Some associated functions: Mm.c2 . OmicNavigator . addAnnotations . addAssays . addBarcodes . addEnrichments . addEnrichmentsLinkouts . addFeatures . addMapping . addMetaFeatures . addMetaFeaturesLinkouts . addModels . addOverlaps . addPlots . addReports . addResults . addResultsLinkouts . addSamples . addTests . basal.vs.lp . basal.vs.ml . cam.BasalvsLP . cam.BasalvsML . combineStudies . createStudy . exportStudy . getAnnotations . getAssays . getBarcodeData . getBarcodes . getEnrichments . getEnrichmentsIntersection . getEnrichmentsLinkouts . getEnrichmentsNetwork . getEnrichmentsTable . getEnrichmentsUpset . getFavicons . getFeatures . getInstalledStudies . getLinkFeatures . getMapping . getMetaFeatures . getMetaFeaturesLinkouts . getMetaFeaturesTable . getModels . getNodeFeatures . getOverlaps . getPackageVersion . getPlots . getPlottingData . getReportLink . getReports . getResults . getResultsIntersection . getResultsLinkouts . getResultsTable . getResultsUpset . getSamples . getTests . getUpsetCols . group . importStudy . installApp . installStudy . lane . lcpm . listStudies . plotStudy . removeStudy . samplenames . shared-add . shared-data . shared-get . shared-upset . startApp . summary.onStudy . validateStudy .
Some associated R codes: add.R . app.R . check.R . combine.R . data.R . export.R . get.R . import.R . local.R . overlaps.R . plots.R . print.R . sanitize.R . summary.R . tests.R . upset.R . utility.R . validate.R . zzz.R . Full OmicNavigator package functions and examples
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