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NMproject  

Script Based "NONMEM" Model Development
View on CRAN: Click here


Download and install NMproject package within the R console
Install from CRAN:
install.packages("NMproject")

Install from Github:
library("remotes")
install_github("cran/NMproject")

Install by package version:
library("remotes")
install_version("NMproject", "0.6.9")



Attach the package and use:
library("NMproject")
Maintained by
Tarj Sahota
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-08-09
Latest Update: 2023-04-24
Description:
Industrialisation of NONMEMhttpswww.iconplc.cominnovationnonmem via fully and rapidly reusablemodel development workflows entirely within RStudio. Quickly get startedwith new models by importing NONMEM templates from the built-in codelibrary. Manipulate NONMEM code from within R either via the trackedmanual edit interface or programmatically via convenience functions.Script workflows by piping sequences of model building steps from controlfile creation to execution to post-processing and evaluation. Run cachingmakes workflows R markdown friendly for easy documentation of thoughts andmodelling decisions alongside executable code. Share reuse and recycleworkflows for new problems.
How to cite:
Tarj Sahota (2021). NMproject: Script Based "NONMEM" Model Development. R package version 0.6.9, https://cran.r-project.org/web/packages/NMproject
Previous versions and publish date:
0.6.2 (2021-08-09 16:20), 0.6.4 (2021-08-18 11:00), 0.6.5 (2021-09-02 18:50), 0.6.7 (2021-10-17 20:00), 0.6.8 (2022-09-06 01:10), 0.6.9 (2022-09-30 00:40)
Other packages that cited NMproject R package
View NMproject citation profile
Other R packages that NMproject depends, imports, suggests or enhances
Functions, R codes and Examples using the NMproject R package
Some associated functions: NMproject-package . NONMEM_version . add_mixed_param . add_remove_covs . append_nonmem_var . apply_manual_edit . as_nm_generic . as_nm_list . based_on . bind_covariate_results . block-omega-sigma . boot_to_csv . change_parent . check_installation . child . code_library . coef_widelong . comment_lines . completed_nm . cond_num . convert_to_simulation . cov_cov_plot . cov_forest_data . cov_forest_plot . covariance_matrix . covariance_plot . covariate_step_tibble . ctl_character . ctl_contents . ctl_list . ctl_path . data_filter_char . data_ignore_char . data_path . decision . delete_dollar . dollar . dollar_subroutine . exclude_rows . fill_input . find_nonmem . gen_sim_path . git_cmd_available . git_hooks . grapes-f-greater-than-grapes . gsub_ctl . ignore . import . info_scripts . init_theta . input_data . insert_dollar . is_finished . is_full_path . is_nm . is_nmproject_dir . is_rstudio . is_successful . job_info . job_stats . job_time_spacing . kill_job . list_dirs . ls_code_library . ls_scripts . make_OCC_every_dose . make_boot_datasets . make_xv_datasets . map_nm . new_nm . nm . nm_create_analysis_project . nm_default_dirs . nm_default_fields . nm_diff . nm_dir . nm_getsetters . nm_getsetters_execution . nm_list_gather . nm_output . nm_output_path . nm_read_table . nm_render . nm_row . nm_summary . nm_tran . nm_tran_command . nm_tree . nmsave . nonmem_code_to_r . ofv . omega_matrix . output_table . overwrite_behaviour . parallel_execute . param_cov_diag . parent_run . pipe . plot_iter . plot_iter_data . plot_iter_dygraph . plot_iter_ggplot . ppc . psn_available . psn_check . psn_style_scm . read_derived_data . reexports . relative_path . remove_parameter . rename_parameter . rmd_to_vignettes . rr . run_all_scripts . run_dir_path . run_nm . run_nm_single . search_raw . setup_code_completion . setup_nm_demo . sge_parallel_execute . shiny_nm . show_ctl . show_out . simple_field . stage . start_manual_edit . status . status_table . subroutine . system_cmd . system_nm . system_nm_available . system_nm_default . system_nm_intern . tail_lst . target . temp_files . test_relations . update_parameters . valid_package_name . view_patch . wait_finish . wait_for . wipe_run . write_ctl . write_derived_data . 
Some associated R codes: NMproject-options.R . NMproject-package.R . Vectorize.R . addin-apps.R . apply_manual_edit.R . basic-ctl-manipulation.R . basic_methods.R . boot.R . cache.R . check_installation.R . covariate-explore.R . cran_note_handle.R . data_filter.R . decision.R . deprecated.R . derived-data-prep.R . developer-funs.R . directory-management.R . dollar_input.R . find-nonmem.R . import-code.R . init_funs.R . input_data.R . job_stats.R . low-level-ctl-handling-funs.R . make_OCC_every_dose.R . make_project.R . manual-edit.R . monitoring.R . nm-gettersetters.R . nm_diff.R . nm_object.R . nm_read_table.R . nm_render.R . nm_tran.R . nm_tree.R . nmsave.R . ofv.R . output_table.R . param-manipulate.R . plot_iter.R . post-run-summaries.R . prompt_overwrite.R . psn_style_scm.R . read_ext.R . rmd_to_vignette.R . run_nm.R . shiny-apps.R . show-file.R . sim-diagnostics.R . snippet_setup.R . stepwise-covariate.R . subroutine.R . system-hooks.R . text.R . todo.R . update_parameters.R . utils.R . with_temp_git_config.R . zzz.R .  Full NMproject package functions and examples
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