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NGSToolKit  

RNA-Seq Analysis and Genome Visualization 'Shiny' Platform
View on CRAN: Click here


Download and install NGSToolKit package within the R console
Install from CRAN:
install.packages("NGSToolKit")

Install from Github:
library("remotes")
install_github("cran/NGSToolKit")

Install by package version:
library("remotes")
install_version("NGSToolKit", "0.1.4")



Attach the package and use:
library("NGSToolKit")
Maintained by
Sona Charles
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-09-12
Latest Update: 2026-09-12
Description:
Interactive 'Shiny' web application for comprehensive RNA-Seq data analysis, quality control, differential expression analysis with 'DESeq2', dimensionality reduction (PCA, t-SNE, UMAP), clustering, and integrated 'JBrowse 2' genome visualization. For differential expression analysis methods, see Love (2014) <doi:10.1186/s13059-014-0550-8>.
How to cite:
Sona Charles (2026). NGSToolKit: RNA-Seq Analysis and Genome Visualization 'Shiny' Platform. R package version 0.1.4, https://cran.r-project.org/web/packages/NGSToolKit. Accessed 24 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited NGSToolKit R package
View NGSToolKit citation profile
Other R packages that NGSToolKit depends, imports, suggests or enhances
Complete documentation for NGSToolKit
Functions, R codes and Examples using the NGSToolKit R package
Full NGSToolKit package functions and examples
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