R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
NACHO
View on CRAN: Click
here
Download and install NACHO package within the R console
Install from CRAN:
install.packages("NACHO")
Install from Github:
library("remotes")
install_github("cran/NACHO")
Install by package version:
library("remotes")
install_version("NACHO", "2.0.6")
Attach the package and use:
library("NACHO")
Maintained by
Mickaël Canouil
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.NACHO . https://github.com/mcanouil/NACHO/issues . https://github.com/mcanouil/NACHO/ . https://m.canouil.dev/NACHO/ . NACHO citation info . NACHO results . NACHO.pdf . NACHO-analysis . NACHO . NACHO_2.0.6.tar.gz . NACHO_2.0.6.zip . NACHO_2.0.6.zip . NACHO_2.0.6.zip . NACHO_2.0.6.tgz . NACHO_2.0.6.tgz . NACHO_2.0.6.tgz . NACHO_2.0.6.tgz . NACHO_2.0.6.tgz . NACHO_2.0.6.tgz . NACHO archive . https://CRAN.R-project.org/package=NACHO .
First Published: 2019-04-28
Latest Update: 2024-01-12
Description:
NanoString nCounter data are gene expression assays
where there is no need for the use of enzymes or amplification
protocols and work with fluorescent barcodes (Geiss et al. (2018)
). Each barcode is assigned a
messenger-RNA/micro-RNA (mRNA/miRNA) which after bonding with its
target can be counted. As a result each count of a specific barcode
represents the presence of its target mRNA/miRNA. 'NACHO' (NAnoString
quality Control dasHbOard) is able to analyse the exported NanoString
nCounter data and facilitates the user in performing a quality
control. 'NACHO' does this by visualising quality control metrics,
expression of control genes, principal components and sample specific
size factors in an interactive web application.
How to cite:
Mickaël Canouil (2019). NACHO: NanoString Quality Control Dashboard. R package version 2.0.6, https://cran.r-project.org/web/packages/NACHO. Accessed 03 Apr. 2025.
Previous versions and publish date:
0.5.5 (2019-04-28 11:00), 0.5.6 (2019-04-29 21:30), 0.6.0 (2019-10-07 14:10), 0.6.1 (2019-10-12 09:30), 1.0.0 (2020-01-09 21:00), 1.0.1 (2020-05-27 00:20), 1.0.2 (2021-01-05 19:40), 1.1.0 (2021-01-14 16:10), 2.0.0 (2022-05-31 11:20), 2.0.1 (2022-11-25 01:10), 2.0.2 (2022-12-06 01:32), 2.0.4 (2023-04-01 16:00), 2.0.5 (2023-08-07 21:30)
Other packages that cited NACHO R package
View NACHO citation profile
Other R packages that NACHO depends,
imports, suggests or enhances
Complete documentation for NACHO
Functions, R codes and Examples using
the NACHO R package
Some associated functions: GSE74821 . NACHO-package . autoplot.nacho . autoplot . check_outliers . deploy . load_rcc . normalise . print.nacho . render . visualise .
Some associated R codes: GSE74821.R . NACHO-package.R . autoplot.R . check_outliers.R . deploy.R . factor_calculation.R . find_housekeeping.R . format_counts.R . format_tag_content.R . geometric_housekeeping.R . geometric_mean.R . geometric_probes.R . load_rcc.R . norm_geo.R . norm_glm.R . normalise.R . normalise_counts.R . print.R . probe_exclusion.R . qc_features.R . qc_imaging.R . qc_limit_detection.R . qc_pca.R . qc_positive_control.R . qc_rcc.R . read_rcc.R . read_tags.R . render.R . utils.R . visualise.R . Full NACHO package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
RobustANOVA
Robust tests (RW, RPB and RGF) are provided for testing the equality of several long-tailed symmetri ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Gamze Guven (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
RZooRoH
Functions to identify Homozygous-by-Descent (HBD) segments associated with runs of homozygosity (ROH ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Tom Druet (view profile)
automl
Fits from simple regression to highly customizable deep neural networks
either with gradient descen ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Alex Boulangé (view profile)
jointDiag
Different algorithms to perform approximate joint diagonalization
of a finite set of square matrice ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Cedric Gouy-Pailler (view profile)
RI2by2
Computes attributable effects based confidence interval, permutation test confidence interval, or as ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Joseph Rigdon (view profile)
23,990
R Packages
207,311
Dependencies
64,809
Author Associations
23,991
Publication Badges
