Other packages > Find by keyword >

NACHO  

NanoString Quality Control Dashboard
View on CRAN: Click here


Download and install NACHO package within the R console
Install from CRAN:
install.packages("NACHO")

Install from Github:
library("remotes")
install_github("cran/NACHO")

Install by package version:
library("remotes")
install_version("NACHO", "2.0.6")



Attach the package and use:
library("NACHO")
Maintained by
Mickaël Canouil
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-28
Latest Update: 2024-01-12
Description:
NanoString nCounter data are gene expression assays where there is no need for the use of enzymes or amplification protocols and work with fluorescent barcodes (Geiss et al. (2018) ). Each barcode is assigned a messenger-RNA/micro-RNA (mRNA/miRNA) which after bonding with its target can be counted. As a result each count of a specific barcode represents the presence of its target mRNA/miRNA. 'NACHO' (NAnoString quality Control dasHbOard) is able to analyse the exported NanoString nCounter data and facilitates the user in performing a quality control. 'NACHO' does this by visualising quality control metrics, expression of control genes, principal components and sample specific size factors in an interactive web application.
How to cite:
Mickaël Canouil (2019). NACHO: NanoString Quality Control Dashboard. R package version 2.0.6, https://cran.r-project.org/web/packages/NACHO
Previous versions and publish date:
0.5.5 (2019-04-28 11:00), 0.5.6 (2019-04-29 21:30), 0.6.0 (2019-10-07 14:10), 0.6.1 (2019-10-12 09:30), 1.0.0 (2020-01-09 21:00), 1.0.1 (2020-05-27 00:20), 1.0.2 (2021-01-05 19:40), 1.1.0 (2021-01-14 16:10), 2.0.0 (2022-05-31 11:20), 2.0.1 (2022-11-25 01:10), 2.0.2 (2022-12-06 01:32), 2.0.4 (2023-04-01 16:00), 2.0.5 (2023-08-07 21:30)
Other packages that cited NACHO R package
View NACHO citation profile
Other R packages that NACHO depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns