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MorphoRegions  

Analysis of Regionalization Patterns in Serially Homologous Structures
View on CRAN: Click here


Download and install MorphoRegions package within the R console
Install from CRAN:
install.packages("MorphoRegions")

Install from Github:
library("remotes")
install_github("cran/MorphoRegions")

Install by package version:
library("remotes")
install_version("MorphoRegions", "0.1.0")



Attach the package and use:
library("MorphoRegions")
Maintained by
Amandine Gillet
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-08-21
Latest Update: 2024-08-21
Description:
Computes the optimal number of regions (or subdivisions) and their position in serial structures without a priori assumptions and to visualize the results. After reducing data dimensionality with the built-in function for data ordination, regions are fitted as segmented linear regressions along the serial structure. Every region boundary position and increasing number of regions are iteratively fitted and the best model (number of regions and boundary positions) is selected with an information criterion. This package expands on the previous 'regions' package (Jones et al., Science 2018) with improved computation and more fitting and plotting options.
How to cite:
Amandine Gillet (2024). MorphoRegions: Analysis of Regionalization Patterns in Serially Homologous Structures. R package version 0.1.0, https://cran.r-project.org/web/packages/MorphoRegions. Accessed 07 Nov. 2024.
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Complete documentation for MorphoRegions
Functions, R codes and Examples using the MorphoRegions R package
Full MorphoRegions package functions and examples
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