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Morpho  

Calculations and Visualisations Related to Geometric Morphometrics
View on CRAN: Click here


Download and install Morpho package within the R console
Install from CRAN:
install.packages("Morpho")

Install from Github:
library("remotes")
install_github("cran/Morpho")

Install by package version:
library("remotes")
install_version("Morpho", "2.12")



Attach the package and use:
library("Morpho")
Maintained by
Stefan Schlager
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-03-21
Latest Update: 2023-12-06
Description:
A toolset for Geometric Morphometrics and mesh processing. This includes (among other stuff) mesh deformations based on reference points, permutation tests, detection of outliers, processing of sliding semi-landmarks and semi-automated surface landmark placement.
How to cite:
Stefan Schlager (2013). Morpho: Calculations and Visualisations Related to Geometric Morphometrics. R package version 2.12, https://cran.r-project.org/web/packages/Morpho. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.23.3 (2013-03-21 17:50), 0.24.1 (2013-06-17 12:00), 0.25-1 (2013-08-02 11:04), 0.25 (2013-07-24 11:31), 1.0-1 (2013-11-04 17:51), 2.0.1 (2014-02-07 12:45), 2.0.2 (2014-02-24 11:26), 2.0.3-1 (2014-05-13 15:14), 2.0 (2014-02-06 18:52), 2.1 (2014-09-25 17:32), 2.2 (2014-12-16 13:19), 2.3.0 (2015-06-23 15:06), 2.3.1.1 (2016-01-22 10:26), 2.3.1 (2015-12-15 10:35), 2.4.1.1 (2016-09-13 12:10), 2.4 (2016-08-01 14:01), 2.5.1 (2017-04-21 07:53), 2.5 (2017-04-05 15:05), 2.6 (2018-04-24 07:13), 2.7 (2019-05-16 11:50), 2.8 (2020-03-09 14:30), 2.9 (2021-09-09 09:00), 2.10 (2022-09-09 17:23), 2.11 (2023-01-27 12:00)
Other packages that cited Morpho R package
View Morpho citation profile
Other R packages that Morpho depends, imports, suggests or enhances
Complete documentation for Morpho
Functions, R codes and Examples using the Morpho R package
Some associated functions: CAC . CVA . CreateL . LPS2RAS . Morpho-deprecated . Morpho-package . NNshapeReg . PCdist . ProcGPA . RegScore . align2procSym . angle.calc . angleTest . anonymize . applyTransform . areaSphere . areaSpherePart . armaGinv . arrMean3 . array2list . asymPermute . barycenter . bindArr . boneData . cExtract . cSize . checkLM . checkNA . classify . closemeshKD . colors . computeArea . computeTransform . covDist . covW . createAtlas . createMissingList . cutMeshPlane . cutSpace . data2platonic . deformGrid2d . deformGrid3d . equidistantCurve . exVar . fastKmeans . find.outliers . fixLMmirror . fixLMtps . getFaces . getMeaningfulPCs . getOuterViewpoints . getPCscores . getPCtol . getPLSCommonShape . getPLSfromScores . getPLSscores . getPointAlongOutline . getSides . getTrafo4x4 . getTrafoRotaxis . getVisibleVertices . groupPCA . histGroup . icpmat . invertFaces . kendalldist . line2plane . lineplot . list2array . mcNNindex . mergeMeshes . mesh2grey . mesh2ply . meshDist . meshPlaneIntersect . meshcube . meshres . mirror . mirror2plane . name2factor . nose . pcAlign . pcaplot3d . permudist . permuvec . placePatch . plot.slider3d . plotAtlas . plotNormals . pls2B . plsCoVar . plsCoVarCommonShape . ply2mesh . points2plane . prcompfast . predict.CVA . predict.bgPCA . predictPLSfromData . predictPLSfromScores . predictRelWarps . predictShape.lm . proc.weight . procAOVsym . procSym . projRead . qqmat . quad2trimesh . r2morphoj . ray2mesh . read.csv.folder . read.fcsv . read.lmdta . read.mpp . read.pts . read.slicerjson . readLandmarks.csv . readallTPS . regdist . relWarps . relaxLM . render . resampleCurve . restoreFromPCA . restoreShapes . retroDeform3d . retroDeformMesh . rotaxis3d . rotaxisMat . rotmesh.onto . rotonmat . rotonto . scalemesh . slider2d . slider3d . solutionSpace . sortCurve . symmetrize . tangentPlane . tps3d . typprob . updateIndices . updateNormals . vecx . vertex . virtualMeshScan . warpmovie3d . write.fcsv . write.pts . write.slicerjson . 
Some associated R codes: Morpho-package.R .  Full Morpho package functions and examples
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