R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
MiRSEA
View on CRAN: Click
here
Download and install MiRSEA package within the R console
Install from CRAN:
install.packages("MiRSEA")
Install from Github:
library("remotes")
install_github("cran/MiRSEA") Install by package version:
library("remotes")
install_version("MiRSEA", "1.1.1") Attach the package and use:
library("MiRSEA")
Maintained by
Junwei Han
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-06-01
Latest Update: 2024-01-24
Description:
The tools for 'MicroRNA Set Enrichment Analysis' can identify risk pathways(or prior gene sets) regulated by microRNA set in the context of microRNA expression data. (1) This package constructs a correlation profile of microRNA and pathways by the hypergeometric statistic test. The gene sets of pathways derived from the three public databases (Kyoto Encyclopedia of Genes and Genomes ('KEGG'); 'Reactome'; 'Biocarta') and the target gene sets of microRNA are provided by four databases('TarBaseV6.0'; 'mir2Disease'; 'miRecords'; 'miRTarBase';). (2) This package can quantify the change of correlation between microRNA for each pathway(or prior gene set) based on a microRNA expression data with cases and controls. (3) This package uses the weighted Kolmogorov-Smirnov statistic to calculate an enrichment score (ES) of a microRNA set that co-regulate to a pathway , which reflects the degree to which a given pathway is associated with the specific phenotype. (4) This package can provide the visualization of the results.
How to cite:
Junwei Han (2015). MiRSEA: 'MicroRNA' Set Enrichment Analysis. R package version 1.1.1, https://cran.r-project.org/web/packages/MiRSEA. Accessed 06 Aug. 2026.
Previous versions and publish date:
Other packages that cited MiRSEA R package
View MiRSEA citation profile
Other R packages that MiRSEA depends,
imports, suggests or enhances
Complete documentation for MiRSEA
Functions, R codes and Examples using
the MiRSEA R package
Some associated functions: Corrp2miRfile . EnrichmentScore . EnrichmentScore2 . GetExampleData . GetMiRTargetData . GetPathwayData . HeatMapPlot . MiRSEA-internal . MiRSEA-package . MirSEA . MsReport . PlotCorrelation . PlotHeatMap . PlotRunEnrichment . S2N . envData .
Some associated R codes: Corrp2miRfile.R . EnrichmentScore.R . GetExampleData.R . GetMiRTargetData.R . GetPathwayData.R . MirSEA.R . MsReport.R . PlotCorrelation.R . PlotHeatMap.R . PlotRunEnrichment.R . S2N.R . getEnvironmentData.R . Full MiRSEA package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
RRedshiftSQL
Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'. ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Michael Treadwell (view profile)
lsmeans
Obtain least-squares means for linear, generalized linear,
and mixed models. Compute contrasts or l ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Russell Lenth (view profile)
TMDb
Provides an R-interface to the TMDb API (see TMDb API on < ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Andrea Capozio (view profile)
SAMBA
Health research using data from electronic health records (EHR) has gained
popularity, but miscla ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Alexander Rix (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
28,083
R Packages
239,283
Dependencies
74,457
Author Associations
28,084
Publication Badges
