Other packages > Find by keyword >

MetChem  

Chemical Structural Similarity Analysis
View on CRAN: Click here


Download and install MetChem package within the R console
Install from CRAN:
install.packages("MetChem")

Install from Github:
library("remotes")
install_github("cran/MetChem")

Install by package version:
library("remotes")
install_version("MetChem", "0.5")



Attach the package and use:
library("MetChem")
Maintained by
Stefano Cacciatore
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-12-20
Latest Update: 2025-06-04
Description:
A new pipeline to explore chemical structural similarity across metabolite. It allows to classify metabolites in structurally-related modules and identify common shared functional groups. KODAMA algorithm is used to highlight structural similarity between metabolites. See Cacciatore S, Tenori L, Luchinat C, Bennett PR, MacIntyre DA. (2017) Bioinformatics , Cacciatore S, Luchinat C, Tenori L. (2014) Proc Natl Acad Sci USA , and Abdel-Shafy EA, Melak T, MacIntyre DA, Zadra G, Zerbini LF, Piazza S, Cacciatore S. (2023) Bioinformatics Advances .
How to cite:
Stefano Cacciatore (2022). MetChem: Chemical Structural Similarity Analysis. R package version 0.5, https://cran.r-project.org/web/packages/MetChem. Accessed 16 Jul. 2026.
Previous versions and publish date:
0.1 (2022-12-20 14:00), 0.2 (2023-02-02 14:00), 0.3 (2023-02-28 08:22), 0.4 (2023-07-06 09:43), 0.5 (2025-06-04 18:30), (2026-07-09 08:10)
Other packages that cited MetChem R package
View MetChem citation profile
Other R packages that MetChem depends, imports, suggests or enhances
Complete documentation for MetChem
Functions, R codes and Examples using the MetChem R package
Full MetChem package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

wordnet  
WordNet Interface
An interface to WordNet using the Jawbone Java API to WordNet. WordNet (< ...
Download / Learn more Package Citations See dependency  
bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  
tibble  
Simple Data Frames
Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the tradi ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA