Other packages > Find by keyword >

MOSS  

Multi-Omic Integration via Sparse Singular Value Decomposition
View on CRAN: Click here


Download and install MOSS package within the R console
Install from CRAN:
install.packages("MOSS")

Install from Github:
library("remotes")
install_github("cran/MOSS")

Install by package version:
library("remotes")
install_version("MOSS", "0.2.2")



Attach the package and use:
library("MOSS")
Maintained by
Agustin Gonzalez-Reymundez
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-01-19
Latest Update:
Description:
High dimensionality, noise and heterogeneity among samples and features challenge the omic integration task. Here we present an omic integration method based on sparse singular value decomposition (SVD) to deal with these limitations, by: a. obtaining the main axes of variation of the combined omics, b. imposing sparsity constraints at both subjects (rows) and features (columns) levels using Elastic Net type of shrinkage, and c. allowing both linear and non-linear projections (via t-Stochastic Neighbor Embedding) of the omic data to detect clusters in very convoluted data (Gonzalez-Reymundez et. al, 2022) .
How to cite:
Agustin Gonzalez-Reymundez (2021). MOSS: Multi-Omic Integration via Sparse Singular Value Decomposition. R package version 0.2.2, https://cran.r-project.org/web/packages/MOSS. Accessed 16 Jul. 2026.
Previous versions and publish date:
0.1.0 (2021-01-19 10:20), 0.2.0 (2021-07-16 17:10), 0.2.2 (2022-03-25 16:50), (2026-07-09 08:09)
Other packages that cited MOSS R package
View MOSS citation profile
Other R packages that MOSS depends, imports, suggests or enhances
Complete documentation for MOSS
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

wordnet  
WordNet Interface
An interface to WordNet using the Jawbone Java API to WordNet. WordNet (< ...
Download / Learn more Package Citations See dependency  
stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  
bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  
tarchetypes  
Archetypes for Targets
Function-oriented Make-like declarative pipelines for Statistics and data science are supported in t ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA