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MINTplates  

Encode "License-Plates" from Sequences and Decode Them Back
View on CRAN: Click here


Download and install MINTplates package within the R console
Install from CRAN:
install.packages("MINTplates")

Install from Github:
library("remotes")
install_github("cran/MINTplates")

Install by package version:
library("remotes")
install_version("MINTplates", "1.0.1")



Attach the package and use:
library("MINTplates")
Maintained by
Shanliang Zhong
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-08-13
Latest Update: 2021-09-03
Description:
It can be used to create/encode molecular "license-plates" from sequences and to also decode the "license-plates" back to sequences. While initially created for transfer RNA-derived small fragments (tRFs), this tool can be used for any genomic sequences including but not limited to: tRFs, microRNAs, etc. The detailed information can reference to Pliatsika V, Loher P, Telonis AG, Rigoutsos I (2016) . It can also be used to annotate tRFs. The detailed information can reference to Loher P, Telonis AG, Rigoutsos I (2017) .
How to cite:
Shanliang Zhong (2021). MINTplates: Encode "License-Plates" from Sequences and Decode Them Back. R package version 1.0.1, https://cran.r-project.org/web/packages/MINTplates. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.0 (2021-08-13 11:10)
Other packages that cited MINTplates R package
View MINTplates citation profile
Other R packages that MINTplates depends, imports, suggests or enhances
Complete documentation for MINTplates
Functions, R codes and Examples using the MINTplates R package
Some associated functions: annotate_tRF . deseqs . enseqs . exclusive . source_tRNA . source_tRNA2 . tRFtype . 
Some associated R codes: MINTplates.R .  Full MINTplates package functions and examples
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