Other packages > Find by keyword >

MAP  

Multimodal Automated Phenotyping
View on CRAN: Click here


Download and install MAP package within the R console
Install from CRAN:
install.packages("MAP")

Install from Github:
library("remotes")
install_github("cran/MAP")

Install by package version:
library("remotes")
install_version("MAP", "1.0.0")



Attach the package and use:
library("MAP")
Maintained by
Thomas Charlon
[Scholar Profile | Author Map]
First Published: 2019-04-01
Latest Update: 2019-04-01
Description:
Electronic health records (EHR) linked with biorepositories are a powerful platform for translational studies. A major bottleneck exists in the ability to phenotype patients accurately and efficiently. Towards that end, we developed an automated high-throughput phenotyping method integrating International Classification of Diseases (ICD) codes and narrative data extracted using natural language processing (NLP). Specifically, our proposed method, called MAP (Map Automated Phenotyping algorithm), fits an ensemble of latent mixture models on aggregated ICD and NLP counts along with healthcare utilization. The MAP algorithm yields a predicted probability of phenotype for each patient and a threshold for classifying subjects with phenotype yes/no (See Katherine P. Liao, et al. (2019) .).
How to cite:
Thomas Charlon (2019). MAP: Multimodal Automated Phenotyping. R package version 1.0.0, https://cran.r-project.org/web/packages/MAP. Accessed 16 Apr. 2025.
Previous versions and publish date:
0.1.3 (2019-04-01 10:20)
Other packages that cited MAP R package
View MAP citation profile
Other R packages that MAP depends, imports, suggests or enhances
Complete documentation for MAP
Functions, R codes and Examples using the MAP R package
Some associated functions: MAP . 
Some associated R codes: MAP.R .  Full MAP package functions and examples
Downloads during the last 30 days
03/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/14Downloads for MAP510152025303540TrendBars

Today's Hot Picks in Authors and Packages

MultiKink  
Estimation and Inference for Multi-Kink Quantile Regression
Estimation and inference for multiple kink quantile regression for longitudinal data and the i.i.d d ...
Download / Learn more Package Citations See dependency  
hkclustering  
Ensemble Clustering using K Means and Hierarchical Clustering
Implements an ensemble algorithm for clustering combining a k-means and a hierarchical clustering ap ...
Download / Learn more Package Citations See dependency  
apache.sedona  
R Interface for Apache Sedona
R interface for 'Apache Sedona' based on 'sparklyr' (). ...
Download / Learn more Package Citations See dependency  
datadictionary  
Create a Data Dictionary
Creates a data dictionary from any dataframe or tibble in your R environment. You can opt to add va ...
Download / Learn more Package Citations See dependency  
MM4LMM  
Inference of Linear Mixed Models Through MM Algorithm
The main function MMEst() performs (Restricted) Maximum Likelihood in a variance component mixed mod ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,993

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA