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MAAPER
View on CRAN: Click
here
Download and install MAAPER package within the R console
Install from CRAN:
install.packages("MAAPER")
Install from Github:
library("remotes")
install_github("cran/MAAPER")
Install by package version:
library("remotes")
install_version("MAAPER", "1.1.1")
Attach the package and use:
library("MAAPER")
Maintained by
Wei Vivian Li
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.MAAPER . https://github.com/Vivianstats/MAAPER . MAAPER results . MAAPER.pdf . MAAPER: Model-based analysis of alternative polyadenylation using 3' end-linked reads . MAAPER_1.1.1.tar.gz . MAAPER_1.1.1.zip . MAAPER_1.1.1.zip . MAAPER_1.1.1.zip . MAAPER_1.1.1.tgz . MAAPER_1.1.1.tgz . MAAPER_1.1.1.tgz . MAAPER_1.1.1.tgz . MAAPER_1.1.1.tgz . MAAPER_1.1.1.tgz . MAAPER archive . https://CRAN.R-project.org/package=MAAPER .
First Published: 2021-06-21
Latest Update: 2021-08-14
Description:
A computational method developed for model-based analysis of alternative polyadenylation (APA) using 3' end-linked reads. It accurately assigns 3' RNA-seq reads to polyA sites through statistical modeling, and generates multiple statistics for APA analysis. Please also see Li WV, Zheng D, Wang R, Tian B (2021) .
How to cite:
Wei Vivian Li (2021). MAAPER: Analysis of Alternative Polyadenylation Using 3' End-Linked Reads. R package version 1.1.1, https://cran.r-project.org/web/packages/MAAPER. Accessed 29 Mar. 2025.
Previous versions and publish date:
1.1.0 (2021-06-21 11:40)
Other packages that cited MAAPER R package
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Other R packages that MAAPER depends,
imports, suggests or enhances
Complete documentation for MAAPER
Functions, R codes and Examples using
the MAAPER R package
Some associated functions: maaper .
Some associated R codes: get_estimation.R . get_reads_from_bam.R . get_training_v5.R . gtf_to_gene_models.R . maaper.R . main.R . main_predict.R . utils.R . Full MAAPER package functions and examples
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