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LocaTT  

Geographically-Conscious Taxonomic Assignment for Metabarcoding
View on CRAN: Click here


Download and install LocaTT package within the R console
Install from CRAN:
install.packages("LocaTT")

Install from Github:
library("remotes")
install_github("cran/LocaTT")

Install by package version:
library("remotes")
install_version("LocaTT", "1.1.2")



Attach the package and use:
library("LocaTT")
Maintained by
Kenen Goodwin
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-30
Latest Update: 2023-10-30
Description:
A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at . A manuscript describing these methods is in preparation.
How to cite:
Kenen Goodwin (2023). LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding. R package version 1.1.2, https://cran.r-project.org/web/packages/LocaTT. Accessed 21 Nov. 2024.
Previous versions and publish date:
1.1.1 (2023-10-30 14:00)
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Complete documentation for LocaTT
Functions, R codes and Examples using the LocaTT R package
Full LocaTT package functions and examples
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