Other packages > Find by keyword >

LocaTT  

Geographically-Conscious Taxonomic Assignment for Metabarcoding
View on CRAN: Click here


Download and install LocaTT package within the R console
Install from CRAN:
install.packages("LocaTT")

Install from Github:
library("remotes")
install_github("cran/LocaTT")

Install by package version:
library("remotes")
install_version("LocaTT", "1.1.2")



Attach the package and use:
library("LocaTT")
Maintained by
Kenen Goodwin
[Scholar Profile | Author Map]
First Published: 2023-10-30
Latest Update: 2023-10-30
Description:
A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at . A manuscript describing these methods is in preparation.
How to cite:
Kenen Goodwin (2023). LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding. R package version 1.1.2, https://cran.r-project.org/web/packages/LocaTT. Accessed 03 Apr. 2025.
Previous versions and publish date:
1.1.1 (2023-10-30 14:00)
Other packages that cited LocaTT R package
View LocaTT citation profile
Other R packages that LocaTT depends, imports, suggests or enhances
Complete documentation for LocaTT
Functions, R codes and Examples using the LocaTT R package
Full LocaTT package functions and examples
Downloads during the last 30 days
03/0403/0503/0603/0703/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/01Downloads for LocaTT010203040506070TrendBars

Today's Hot Picks in Authors and Packages

jointDiag  
Joint Approximate Diagonalization of a Set of Square Matrices
Different algorithms to perform approximate joint diagonalization of a finite set of square matrice ...
Download / Learn more Package Citations See dependency  
RI2by2  
Randomization Inference for Treatment Effects on a Binary Outcome
Computes attributable effects based confidence interval, permutation test confidence interval, or as ...
Download / Learn more Package Citations See dependency  
RobustANOVA  
Robust One-Way ANOVA Tests under Heteroscedasticity and Nonnormality
Robust tests (RW, RPB and RGF) are provided for testing the equality of several long-tailed symmetri ...
Download / Learn more Package Citations See dependency  
automl  
Deep Learning with Metaheuristic
Fits from simple regression to highly customizable deep neural networks either with gradient descen ...
Download / Learn more Package Citations See dependency  
RPMG  
Graphical User Interface (GUI) for Interactive R Analysis Sessions
Really Poor Man's Graphical User Interface, used to create interactive R analysis sessions with simp ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

23,990

R Packages

207,311

Dependencies

64,809

Author Associations

23,991

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA