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LakeMetabolizer
View on CRAN: Click
here
Download and install LakeMetabolizer package within the R console
Install from CRAN:
install.packages("LakeMetabolizer")
Install from Github:
library("remotes")
install_github("cran/LakeMetabolizer") Install by package version:
library("remotes")
install_version("LakeMetabolizer", "1.5.6") Attach the package and use:
library("LakeMetabolizer")
Maintained by
Jake Zwart
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-08-11
Latest Update: 2025-09-01
Description:
A collection of tools for the calculation of freewater metabolism
from in situ time series of dissolved oxygen, water temperature, and,
optionally, additional environmental variables. LakeMetabolizer implements
5 different metabolism models with diverse statistical underpinnings:
bookkeeping, ordinary least squares, maximum likelihood, Kalman filter,
and Bayesian. Each of these 5 metabolism models can be combined with
1 of 7 models for computing the coefficient of gas exchange across the
air
How to cite:
Jake Zwart (2014). LakeMetabolizer: Tools for the Analysis of Ecosystem Metabolism. R package version 1.5.6, https://cran.r-project.org/web/packages/LakeMetabolizer. Accessed 29 Jun. 2026.
Previous versions and publish date:
Other packages that cited LakeMetabolizer R package
View LakeMetabolizer citation profile
Other R packages that LakeMetabolizer depends,
imports, suggests or enhances
Complete documentation for LakeMetabolizer
Functions, R codes and Examples using
the LakeMetabolizer R package
Some associated functions: calc.lw.net . calc.zeng . get.Ts . get.vars . getSchmidt . has.vars . is.day . is.night . k.read.base . k.read . k600.2.kGAS . load.all.data . load.meta . metab.bayesian . metab.bookkeep . metab.kalman . metab.mle . metab . metab.ols . o2.at.sat . par.to.sw . rmv.vars . sun.rise.set . sw.to.par . temp.kalman . var.indx . watts.in . wind.scale .
Some associated R codes: addNAs.R . byeShort.R . calc.lw.net.R . calc.zeng.R . date2doy.R . getSchmidt.R . helper.functions.R . k.cole.R . k.crusius.R . k.heiskanen.R . k.macIntyre.R . k.read.R . k.read.soloviev.R . k.vachon.R . k600.2.kGAS.R . load.all.data.R . load.meta.R . metab.R . metab.bayesian.R . metab.bookkeep.R . metab.kalman.R . metab.mle.R . metab.ols.R . o2.at.sat.R . par.to.sw.R . sun.rise.set.R . sw.to.par.R . temp.kalman.R . wind.scale.R . Full LakeMetabolizer package functions and examples
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