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Jacquard  

Estimation of Jacquard's Genetic Identity Coefficients
View on CRAN: Click here


Download and install Jacquard package within the R console
Install from CRAN:
install.packages("Jacquard")

Install from Github:
library("remotes")
install_github("cran/Jacquard")

Install by package version:
library("remotes")
install_version("Jacquard", "1.0.2")



Attach the package and use:
library("Jacquard")
Maintained by
Jan Graffelman
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-09-17
Latest Update: 2024-09-17
Description:
Contains procedures to estimate the nine condensed Jacquard genetic identity coefficients (Jacquard, 1974) <doi:10.1007/978-3-642-88415-3> by constrained least squares (Graffelman et al., 2024) <doi:10.1101/2024.03.25.586682> and by the method of moments (Csuros, 2014) <doi:10.1016/j.tpb.2013.11.001>. These procedures require previous estimation of the allele frequencies. Functions are supplied that estimate relationship parameters that derive from the Jacquard coefficients, such as individual inbreeding coefficients and kinship coefficients.
How to cite:
Jan Graffelman (2024). Jacquard: Estimation of Jacquard's Genetic Identity Coefficients. R package version 1.0.2, https://cran.r-project.org/web/packages/Jacquard. Accessed 07 Nov. 2024.
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