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IgAScores  

Score Taxon-Level IgA Binding in IgA-Seq Experiments
View on CRAN: Click here


Download and install IgAScores package within the R console
Install from CRAN:
install.packages("IgAScores")

Install from Github:
library("remotes")
install_github("cran/IgAScores")

Install by package version:
library("remotes")
install_version("IgAScores", "0.1.2")



Attach the package and use:
library("IgAScores")
Maintained by
Matthew Jackson
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-09-01
Latest Update: 2020-09-01
Description:
Functions to calculate indices used to score immunoglobulin A (IgA) binding of bacteria in IgA sequencing (IgA-Seq) experiments. This includes the original Kau and Palm indices and more recent methods as described in Jackson et al. (2020) . Additionally the package contains a function to simulate IgA-Seq data and an example experimental data set for method testing.
How to cite:
Matthew Jackson (2020). IgAScores: Score Taxon-Level IgA Binding in IgA-Seq Experiments. R package version 0.1.2, https://cran.r-project.org/web/packages/IgAScores. Accessed 11 Jun. 2026.
Previous versions and publish date:
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Complete documentation for IgAScores
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