Other packages > Find by keyword >

ICBioMark  

Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers
View on CRAN: Click here


Download and install ICBioMark package within the R console
Install from CRAN:
install.packages("ICBioMark")

Install from Github:
library("remotes")
install_github("cran/ICBioMark")

Install by package version:
library("remotes")
install_version("ICBioMark", "0.1.4")



Attach the package and use:
library("ICBioMark")
Maintained by
Jacob R. Bradley
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-02-17
Latest Update: 2021-11-15
Description:
Implementation of the methodology proposed in 'Data-driven design of targeted gene panels for estimating immunotherapy biomarkers', Bradley and Cannings (2021) . This package allows the user to fit generative models of mutation from an annotated mutation dataset, and then further to produce tunable linear estimators of exome-wide biomarkers. It also contains functions to simulate mutation annotated format (MAF) data, as well as to analyse the output and performance of models.
How to cite:
Jacob R. Bradley (2021). ICBioMark: Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers. R package version 0.1.4, https://cran.r-project.org/web/packages/ICBioMark. Accessed 02 Sep. 2026.
Previous versions and publish date:
0.1.0 (2021-02-17 19:40), 0.1.1 (2021-03-05 10:10), 0.1.2 (2021-03-18 17:10), (2026-07-09 08:06)
Other packages that cited ICBioMark R package
View ICBioMark citation profile
Other R packages that ICBioMark depends, imports, suggests or enhances
Complete documentation for ICBioMark
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
VIM  
Visualization and Imputation of Missing Values
New tools for the visualization of missing and/or imputed values are introduced, which can be used f ...
Download / Learn more Package Citations See dependency  
recmap  
Compute the Rectangular Statistical Cartogram
Implements the RecMap MP2 construction heuristic . This algorithm draw ...
Download / Learn more Package Citations See dependency  
multicmp  
Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
A toolkit containing statistical analysis models motivated by multivariate forms of the Conway-Maxwe ...
Download / Learn more Package Citations See dependency  
ggsci  
Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
A collection of 'ggplot2' color palettes inspired by plots in scientific journals, data visualizati ...
Download / Learn more Package Citations See dependency  

28,437

R Packages

239,283

Dependencies

75,283

Author Associations

28,438

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA