Other packages > Find by keyword >

IBDsim  

Simulation of Chromosomal Regions Shared by Family Members
View on CRAN: Click here


Download and install IBDsim package within the R console
Install from CRAN:
install.packages("IBDsim")

Install from Github:
library("remotes")
install_github("cran/IBDsim")

Install by package version:
library("remotes")
install_version("IBDsim", "0.9-8")



Attach the package and use:
library("IBDsim")
Maintained by
Magnus Dehli Vigeland
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2011-10-15
Latest Update: 2019-04-06
Description:
Simulation of segments shared identical-by-descent (IBD) by pedigree members. Using sex specific recombination rates along the human genome (Kong et. al (2010) ), phased chromosomes are simulated for all pedigree members, either by unconditional gene dropping or conditional on a specified IBD pattern. Additional functions provide summaries and further analysis of the simulated genomes.
How to cite:
Magnus Dehli Vigeland (2011). IBDsim: Simulation of Chromosomal Regions Shared by Family Members. R package version 0.9-8, https://cran.r-project.org/web/packages/IBDsim. Accessed 09 Apr. 2025.
Previous versions and publish date:
0.7 (2011-10-15 21:52), 0.8 (2011-10-24 15:37), 0.9-1 (2012-02-03 12:35), 0.9-2 (2012-12-18 17:38), 0.9-3 (2014-05-29 10:28), 0.9-4 (2014-05-30 20:50), 0.9-5 (2015-07-03 12:50), 0.9-6 (2016-04-28 11:50), 0.9-7 (2017-04-26 19:25), 0.9-8 (2019-04-06 13:42)
Other packages that cited IBDsim R package
View IBDsim citation profile
Other R packages that IBDsim depends, imports, suggests or enhances
Complete documentation for IBDsim
Functions, R codes and Examples using the IBDsim R package
Some associated functions: DecodeMap . IBDsim . alleleSummary . dominant1 . oneLocusIBD . oneLocusJacquard . twoLocusIBD . twoLocusJacquard . 
Some associated R codes: IBDsim.R . alleleSummary.R . genedrop.R . ibd.runs.R . map_utils.R . meiosis.R . ped_utils.R . range_utils.R . summary.ibd.R . twoLocusIBD.R .  Full IBDsim package functions and examples
Downloads during the last 30 days
03/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2803/2903/3004/0104/0204/0604/0704/08Downloads for IBDsim024681012141618202224TrendBars

Today's Hot Picks in Authors and Packages

multitaper  
Spectral Analysis Tools using the Multitaper Method
Implements multitaper spectral analysis using discrete prolate spheroidal sequences (Slepians) and s ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
fisheye  
Transform Base Maps Using Log-Azimuthal Projection
Base maps are transformed to focus on a specific location using an azimuthal logarithmic distance t ...
Download / Learn more Package Citations See dependency  
MultSurvTests  
Permutation Tests for Multivariate Survival Analysis
Multivariate version of the two-sample Gehan and logrank tests, as described in L.J Wei & J.M Lachin ...
Download / Learn more Package Citations See dependency  
cvmdisc  
Cramer von Mises Tests for Discrete or Grouped Distributions
Implements Cramer-von Mises Statistics for testing fit to (1) fully specified discrete distributions ...
Download / Learn more Package Citations See dependency  
prettyglm  
Pretty Summaries of Generalized Linear Model Coefficients
One of the main advantages of using Generalised Linear Models is their interpretability. The goal ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA