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Holomics  

A User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis
View on CRAN: Click here


Download and install Holomics package within the R console
Install from CRAN:
install.packages("Holomics")

Install from Github:
library("remotes")
install_github("cran/Holomics")

Install by package version:
library("remotes")
install_version("Holomics", "1.2.1")



Attach the package and use:
library("Holomics")
Maintained by
Katharina Munk
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-08-21
Latest Update: 2024-06-07
Description:
A 'shiny' application, which allows you to perform single- and multi-omics analyses using your own omics datasets. After the upload of the omics datasets and a metadata file, single-omics is performed for feature selection and dataset reduction. These datasets are used for pairwise- and multi-omics analyses, where automatic tuning is done to identify correlations between the datasets - the end goal of the recommended 'Holomics' workflow. Methods used in the package were implemented in the package 'mixomics' by Florian Rohart,Beno
How to cite:
Katharina Munk (2023). Holomics: A User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis. R package version 1.2.1, https://cran.r-project.org/web/packages/Holomics. Accessed 05 Aug. 2026.
Previous versions and publish date:
1.0.0 (2023-08-21 16:00), 1.1.0 (2024-03-07 21:40), 1.1.1 (2024-06-07 21:10), 1.2.0 (2025-09-12 14:40), (2026-07-09 08:06)
Other packages that cited Holomics R package
View Holomics citation profile
Other R packages that Holomics depends, imports, suggests or enhances
Complete documentation for Holomics
Functions, R codes and Examples using the Holomics R package
Full Holomics package functions and examples
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