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HiCociety
View on CRAN: Click
here
Download and install HiCociety package within the R console
Install from CRAN:
install.packages("HiCociety")
Install from Github:
library("remotes")
install_github("cran/HiCociety") Install by package version:
library("remotes")
install_version("HiCociety", "0.1.38") Attach the package and use:
library("HiCociety")
Maintained by
Sora Yoon
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
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First Published: 2025-05-13
Latest Update: 2025-05-13
Description:
Identifies chromatin interaction modules by constructing a Hi-C contact network based on statistically significant interactions, followed by network clustering. The method enables comparison of module connectivity across two Hi-C datasets and is capable of detecting cell-type-specific regulatory modules. By integrating network analysis with chromatin conformation data, this approach provides insights into the spatial organization of the genome and its functional implications in gene regulation. Author: Sora Yoon (2025) <https://github.com/ysora/HiCociety>.
How to cite:
Sora Yoon (2025). HiCociety: Inferring Chromatin Interaction Modules from 3C-Based Data. R package version 0.1.38, https://cran.r-project.org/web/packages/HiCociety. Accessed 07 Jun. 2026.
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