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HiCociety  

Inferring Chromatin Interaction Modules from 3C-Based Data
View on CRAN: Click here


Download and install HiCociety package within the R console
Install from CRAN:
install.packages("HiCociety")

Install from Github:
library("remotes")
install_github("cran/HiCociety")

Install by package version:
library("remotes")
install_version("HiCociety", "0.1.38")



Attach the package and use:
library("HiCociety")
Maintained by
Sora Yoon
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-05-13
Latest Update: 2025-05-13
Description:
Identifies chromatin interaction modules by constructing a Hi-C contact network based on statistically significant interactions, followed by network clustering. The method enables comparison of module connectivity across two Hi-C datasets and is capable of detecting cell-type-specific regulatory modules. By integrating network analysis with chromatin conformation data, this approach provides insights into the spatial organization of the genome and its functional implications in gene regulation. Author: Sora Yoon (2025) <https://github.com/ysora/HiCociety>.
How to cite:
Sora Yoon (2025). HiCociety: Inferring Chromatin Interaction Modules from 3C-Based Data. R package version 0.1.38, https://cran.r-project.org/web/packages/HiCociety. Accessed 29 Aug. 2026.
Previous versions and publish date:
0.1.38 (2025-05-13 10:20), 0.1.39 (2026-02-16 12:00), (2026-07-09 08:06)
Other packages that cited HiCociety R package
View HiCociety citation profile
Other R packages that HiCociety depends, imports, suggests or enhances
Complete documentation for HiCociety
Functions, R codes and Examples using the HiCociety R package
Full HiCociety package functions and examples
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