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HextractoR  

Integrated Tool for Hairping Extraction of RNA Sequences
View on CRAN: Click here


Download and install HextractoR package within the R console
Install from CRAN:
install.packages("HextractoR")

Install from Github:
library("remotes")
install_github("cran/HextractoR")

Install by package version:
library("remotes")
install_version("HextractoR", "1.4")



Attach the package and use:
library("HextractoR")
Maintained by
Cristian Yones
[Scholar Profile | Author Map]
First Published: 2018-08-17
Latest Update: 2019-08-06
Description:
Simple and integrated tool that automatically extracts and folds all hairpin sequences from raw genome-wide data. It predicts the secondary structure of several overlapped segments, with longer length than the mean length of sequences of interest for the species under processing, ensuring that no one is lost nor inappropriately cut.
How to cite:
Cristian Yones (2018). HextractoR: Integrated Tool for Hairping Extraction of RNA Sequences. R package version 1.4, https://cran.r-project.org/web/packages/HextractoR. Accessed 03 May. 2025.
Previous versions and publish date:
0.4 (2018-08-17 10:50), 1.0 (2018-08-24 01:04), 1.2 (2018-08-28 23:24), 1.3 (2018-10-19 23:10)
Other packages that cited HextractoR R package
View HextractoR citation profile
Other R packages that HextractoR depends, imports, suggests or enhances
Complete documentation for HextractoR
Functions, R codes and Examples using the HextractoR R package
Some associated functions: HextractoR . 
Some associated R codes: HextractoR.R . execBlast.R . extractStems.R . foldSequences.R . separateSequences.R . splitFasta.R . uniqueSequences.R . windowSequence.R .  Full HextractoR package functions and examples
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