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HextractoR
View on CRAN: Click
here
Download and install HextractoR package within the R console
Install from CRAN:
install.packages("HextractoR")
Install from Github:
library("remotes")
install_github("cran/HextractoR") Install by package version:
library("remotes")
install_version("HextractoR", "1.4") Attach the package and use:
library("HextractoR")
Maintained by
Cristian Yones
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-08-17
Latest Update: 2019-08-06
Description:
Simple and integrated tool that automatically extracts and folds all hairpin sequences from raw genome-wide data. It predicts the secondary structure of several overlapped segments, with longer length than the mean length of sequences of interest for the species under processing, ensuring that no one is lost nor inappropriately cut.
How to cite:
Cristian Yones (2018). HextractoR: Integrated Tool for Hairping Extraction of RNA Sequences. R package version 1.4, https://cran.r-project.org/web/packages/HextractoR. Accessed 27 Oct. 2026.
Previous versions and publish date:
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Complete documentation for HextractoR
Functions, R codes and Examples using
the HextractoR R package
Some associated functions: HextractoR .
Some associated R codes: HextractoR.R . execBlast.R . extractStems.R . foldSequences.R . separateSequences.R . splitFasta.R . uniqueSequences.R . windowSequence.R . Full HextractoR package functions and examples
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