Other packages > Find by keyword >

HTGM3D  

Three Dimensional High Throughput 'GoMiner'
View on CRAN: Click here


Download and install HTGM3D package within the R console
Install from CRAN:
install.packages("HTGM3D")

Install from Github:
library("remotes")
install_github("cran/HTGM3D")

Install by package version:
library("remotes")
install_version("HTGM3D", "1.0")



Attach the package and use:
library("HTGM3D")
Maintained by
Barry Zeeberg
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-05-30
Latest Update: 2025-05-30
Description:
The Gene Ontology (GO) Consortium <https://geneontology.org/> organizes genes into hierarchical categories based on biological process (BP), molecular function (MF) and cellular component (CC, i.e., subcellular localization). Tools such as 'GoMiner' (see Zeeberg, B.R., Feng, W., Wang, G. et al. (2003) <doi:10.1186/gb-2003-4-4-r28>) can leverage GO to perform ontological analysis of microarray and proteomics studies, typically generating a list of significant functional categories. To capture the benefit of all three ontologies, I developed 'HTGM3D', a three-dimensional version of 'GoMiner'.
How to cite:
Barry Zeeberg (2025). HTGM3D: Three Dimensional High Throughput 'GoMiner'. R package version 1.0, https://cran.r-project.org/web/packages/HTGM3D. Accessed 10 Mar. 2026.
Previous versions and publish date:
1.0.1 (2026-02-08 11:50), 1.0 (2025-05-30 11:10)
Other packages that cited HTGM3D R package
View HTGM3D citation profile
Other R packages that HTGM3D depends, imports, suggests or enhances
Complete documentation for HTGM3D
Functions, R codes and Examples using the HTGM3D R package
Full HTGM3D package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

gena  
Genetic Algorithm and Particle Swarm Optimization
Implements genetic algorithm and particle swarm algorithm for real-valued functions. Various modific ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
plyr  
Tools for Splitting, Applying and Combining Data
A set of tools that solves a common set of problems: you need to break a big problem down into mana ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA