Other packages > Find by keyword >

Grouphmap  

'Grouphmap' is an Automated One-Step Common Analysis of Batch Expression Profile
View on CRAN: Click here


Download and install Grouphmap package within the R console
Install from CRAN:
install.packages("Grouphmap")

Install from Github:
library("remotes")
install_github("cran/Grouphmap")

Install by package version:
library("remotes")
install_version("Grouphmap", "1.0.0")



Attach the package and use:
library("Grouphmap")
Maintained by
Yuchen Sun
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-09-04
Latest Update: 2023-09-04
Description:
The 'Grouphmap' was implemented in R, an open-source programming environment, and was released under the provided website. The difference analysis is based on the 'limma' package, which can cover gene and protein expression profiles (Reference: Matthew E Ritchie , Belinda Phipson , Di Wu , Yifang Hu , Charity W Law , Wei Shi , Gordon K Smyth (2015) ). The GO enrichment analysis is based on the 'clusterProfiler' package and supports three common species: human, mouse, and yeast (Reference: Guangchuang Yu, Li-Gen Wang, Yanyan Han, Qing-Yu He (2012) ). The results of batch difference analysis and enrichment analysis are output in separate folders for easy viewing and further visualization of the results during the process. The results returned a heatmap in R and exported to 3 folders named DEG, go, and merge.
How to cite:
Yuchen Sun (2023). Grouphmap: 'Grouphmap' is an Automated One-Step Common Analysis of Batch Expression Profile. R package version 1.0.0, https://cran.r-project.org/web/packages/Grouphmap. Accessed 21 Nov. 2024.
Previous versions and publish date:
No previous versions
Other packages that cited Grouphmap R package
View Grouphmap citation profile
Other R packages that Grouphmap depends, imports, suggests or enhances
Complete documentation for Grouphmap
Functions, R codes and Examples using the Grouphmap R package
Full Grouphmap package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

kgschart  
KGS Rank Graph Parser
Restore underlining numeric data from rating history graph of KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency  
pkgdepends  
Package Dependency Resolution and Downloads
Find recursive dependencies of 'R' packages from various sources. Solve the dependencies to obtain ...
Download / Learn more Package Citations See dependency  
crossrun  
Joint Distribution of Number of Crossings and Longest Run
Joint distribution of number of crossings and the longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency  
deductive  
Data Correction and Imputation Using Deductive Methods
Attempt to repair inconsistencies and missing values in data records by using information from vali ...
Download / Learn more Package Citations See dependency  
RcppHNSW  
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R int ...
Download / Learn more Package Citations See dependency  
SCBiclust  
Identifies Mean, Variance, and Hierarchically Clustered Biclusters
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency  

23,229

R Packages

199,929

Dependencies

62,984

Author Associations

23,230

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA