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GoMiner  

Automate the Mapping Between a List of Genes and Gene Ontology Categories
View on CRAN: Click here


Download and install GoMiner package within the R console
Install from CRAN:
install.packages("GoMiner")

Install from Github:
library("remotes")
install_github("cran/GoMiner")

Install by package version:
library("remotes")
install_version("GoMiner", "1.0")



Attach the package and use:
library("GoMiner")
Maintained by
Barry Zeeberg
[Scholar Profile | Author Map]
First Published: 2025-03-25
Latest Update: 2025-03-25
Description:
In gene-expression microarray studies, for example, one generally obtains a list of dozens or hundreds of genes that differ in expression between samples and then asks 'What does all of this mean biologically?' Alternatively, gene lists can be derived conceptually in addition to experimentally. For instance, one might want to analyze a group of genes known as housekeeping genes. The work of the Gene Ontology (GO) Consortium <geneontology.org> provides a way to address that question. GO organizes genes into hierarchical categories based on biological process, molecular function and subcellular localization. The role of 'GoMiner' is to automate the mapping between a list of genes and GO, and to provide a statistical summary of the results as well as a visualization.
How to cite:
Barry Zeeberg (2025). GoMiner: Automate the Mapping Between a List of Genes and Gene Ontology Categories. R package version 1.0, https://cran.r-project.org/web/packages/GoMiner. Accessed 05 May. 2025.
Previous versions and publish date:
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Complete documentation for GoMiner
Functions, R codes and Examples using the GoMiner R package
Full GoMiner package functions and examples
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