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GeoTcgaData
View on CRAN: Click
here
Download and install GeoTcgaData package within the R console
Install from CRAN:
install.packages("GeoTcgaData")
Install from Github:
library("remotes")
install_github("cran/GeoTcgaData")
Install by package version:
library("remotes")
install_version("GeoTcgaData", "1.1.1.992")
Attach the package and use:
library("GeoTcgaData")
Maintained by
Erqiang Hu
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
First Published: 2019-09-16
Latest Update: 2022-11-19
Description:
Gene Expression OmnibusGEO and The Cancer Genome Atlas TCGAprovide us with a wealth of data such as RNA-seq DNA Methylation SNPand Copy number variation data. Its easy to download data from TCGA using thegdc tool but processing these data into a format suitable for bioinformaticsanalysis requires more work. This R package was developed to handle these data.
How to cite:
Erqiang Hu (2019). GeoTcgaData: Processing various types of data on GEO and TCGA. R package version 1.1.1.992, https://cran.r-project.org/web/packages/GeoTcgaData. Accessed 20 Feb. 2025.
Previous versions and publish date:
0.1.0 (2019-09-16 11:30), 0.2.0 (2019-09-23 06:10), 0.2.2 (2020-01-07 12:00), 0.2.3 (2020-02-23 01:10), 0.2.4 (2020-06-09 14:20), 0.2.5 (2021-06-06 09:10), 1.0.0.1 (2021-07-26 20:10), 1.0.0 (2021-07-16 10:50), 1.0.1 (2021-08-02 01:10), 1.0.2 (2021-10-24 11:20), 1.1.0 (2022-08-06 11:10), 1.1.1.992 (2022-09-23 04:20), 1.1.1 (2022-08-12 10:20)
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