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GenoPop  

Genotype Imputation and Population Genomics Efficiently from Variant Call Formatted (VCF) Files
View on CRAN: Click here


Download and install GenoPop package within the R console
Install from CRAN:
install.packages("GenoPop")

Install from Github:
library("remotes")
install_github("cran/GenoPop")

Install by package version:
library("remotes")
install_version("GenoPop", "1.0.0")



Attach the package and use:
library("GenoPop")
Maintained by
Marie Gurke
[Scholar Profile | Author Map]
First Published: 2024-09-11
Latest Update: 2024-09-11
Description:
Tools for efficient processing of large, whole genome genotype data sets in variant call format (VCF). It includes several functions to calculate commonly used population genomic metrics and a method for reference panel free genotype imputation, which is described in the preprint Gurke & Mayer (2024) <doi:10.22541/au.172515591.10119928/v1>.
How to cite:
Marie Gurke (2024). GenoPop: Genotype Imputation and Population Genomics Efficiently from Variant Call Formatted (VCF) Files. R package version 1.0.0, https://cran.r-project.org/web/packages/GenoPop. Accessed 04 Apr. 2025.
Previous versions and publish date:
0.9.3 (2024-09-11 18:10)
Other packages that cited GenoPop R package
View GenoPop citation profile
Other R packages that GenoPop depends, imports, suggests or enhances
Complete documentation for GenoPop
Functions, R codes and Examples using the GenoPop R package
Full GenoPop package functions and examples
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