Other packages > Find by keyword >

GeneScape  

Simulation of Single Cell RNA-Seq Data with Complex Structure
View on CRAN: Click here


Download and install GeneScape package within the R console
Install from CRAN:
install.packages("GeneScape")

Install from Github:
library("remotes")
install_github("cran/GeneScape")

Install by package version:
library("remotes")
install_version("GeneScape", "1.0")



Attach the package and use:
library("GeneScape")
Maintained by
Qi Gao
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-13
Latest Update: 2023-06-13
Description:
Simulating single cell RNA-seq data with complicated structure. This package is developed based on the Splat method (Zappia, Phipson and Oshlack (2017) ). 'GeneScape' incorporates additional features to simulate single cell RNA-seq data with complicated differential expression and correlation structures, such as sub-cell-types, correlated genes (pathway genes) and hub genes.
How to cite:
Qi Gao (2023). GeneScape: Simulation of Single Cell RNA-Seq Data with Complex Structure. R package version 1.0, https://cran.r-project.org/web/packages/GeneScape. Accessed 26 Sep. 2024.
Previous versions and publish date:
No previous versions
Other packages that cited GeneScape R package
View GeneScape citation profile
Other R packages that GeneScape depends, imports, suggests or enhances
Complete documentation for GeneScape
Functions, R codes and Examples using the GeneScape R package
Full GeneScape package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

dyntaper  
Dynamic Stem Profile Models, AKA Tree Taper Equations
Performs calculations with tree taper (or stem profile) equations, including model fitting. The pac ...
Download / Learn more Package Citations See dependency  
crossnma  
Cross-Design & Cross-Format Network Meta-Analysis and Regression
Network meta-analysis and meta-regression (allows including up to three covariates) for individual ...
Download / Learn more Package Citations See dependency  
glmnetUtils  
Utilities for 'Glmnet'
Provides a formula interface for the 'glmnet' package for elasticnet regression, a method for cross ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
ca  
Simple, Multiple and Joint Correspondence Analysis
Computation and visualization of simple, multiple and joint correspondence analysis. ...
Download / Learn more Package Citations See dependency  
UComp  
Automatic Univariate Time Series Modelling of many Kinds
Comprehensive analysis and forecasting of univariate time series using automatic unobserved comp ...
Download / Learn more Package Citations See dependency  

22,869

R Packages

195,887

Dependencies

63,882

Author Associations

22,870

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA