Other packages > Find by keyword >

GeneNMF  

Non-Negative Matrix Factorization for Single-Cell Omics
View on CRAN: Click here


Download and install GeneNMF package within the R console
Install from CRAN:
install.packages("GeneNMF")

Install from Github:
library("remotes")
install_github("cran/GeneNMF")

Install by package version:
library("remotes")
install_version("GeneNMF", "0.6.0")



Attach the package and use:
library("GeneNMF")
Maintained by
Massimo Andreatta
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-02-29
Latest Update: 2024-02-29
Description:
A collection of methods to extract gene programs from single-cell gene expression data using non-negative matrix factorization (NMF). 'GeneNMF' contains functions to directly interact with the 'Seurat' toolkit and derive interpretable gene program signatures.
How to cite:
Massimo Andreatta (2024). GeneNMF: Non-Negative Matrix Factorization for Single-Cell Omics. R package version 0.6.0, https://cran.r-project.org/web/packages/GeneNMF. Accessed 12 Nov. 2024.
Previous versions and publish date:
0.4.0 (2024-02-29 13:22), 0.6.0 (2024-07-22 10:30)
Other packages that cited GeneNMF R package
View GeneNMF citation profile
Other R packages that GeneNMF depends, imports, suggests or enhances
Complete documentation for GeneNMF
Functions, R codes and Examples using the GeneNMF R package
Full GeneNMF package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

snap  
Simple Neural Application
A simple wrapper to easily design vanilla deep neural networks using 'Tensorflow'/'Keras' backend fo ...
Download / Learn more Package Citations See dependency  
visualize  
Graph Probability Distributions with User Supplied Parameters and Statistics
Graphs the pdf or pmf and highlights what area or probability is present in user defined locations. ...
Download / Learn more Package Citations See dependency  
Relectoral  
Electoral Analysis
Functions to obtain an important number of electoral indicators described in the package, which can ...
Download / Learn more Package Citations See dependency  
ggpolypath  
Polygons with Holes for the Grammar of Graphics
Tools for working with polygons with holes in 'ggplot2', with a new 'geom' for drawing a 'polypath' ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
mmrm  
Mixed Models for Repeated Measures
Mixed models for repeated measures (MMRM) are a popular choice for analyzing longitudinal continuou ...
Download / Learn more Package Citations See dependency  

23,171

R Packages

199,134

Dependencies

62,827

Author Associations

23,089

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA