Other packages > Find by keyword >

GenWin  

Spline Based Window Boundaries for Genomic Analyses
View on CRAN: Click here


Download and install GenWin package within the R console
Install from CRAN:
install.packages("GenWin")

Install from Github:
library("remotes")
install_github("cran/GenWin")

Install by package version:
library("remotes")
install_version("GenWin", "1.0")



Attach the package and use:
library("GenWin")
Maintained by
Timothy M. Beissinger
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-09-26
Latest Update: 2022-11-25
Description:
Defines window or bin boundaries for the analysis of genomic data. Boundaries are based on the inflection points of a cubic smoothing spline fitted to the raw data. Along with defining boundaries, a technique to evaluate results obtained from unequally-sized windows is provided. Applications are particularly pertinent for, though not limited to, genome scans for selection based on variability between populations (e.g. using Wright's fixations index, Fst, which measures variability in subpopulations relative to the total population).
How to cite:
Timothy M. Beissinger (2014). GenWin: Spline Based Window Boundaries for Genomic Analyses. R package version 1.0, https://cran.r-project.org/web/packages/GenWin. Accessed 29 Oct. 2026.
Previous versions and publish date:
0.1 (2014-09-26 16:51), (2026-07-09 08:05)
Other packages that cited GenWin R package
View GenWin citation profile
Other R packages that GenWin depends, imports, suggests or enhances
Complete documentation for GenWin
Functions, R codes and Examples using the GenWin R package
Some associated functions: chr6 . splineAnalyze . 
Some associated R codes: chr6-data.R . spline_analyze.R .  Full GenWin package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

personalized2part  
Two-Part Estimation of Treatment Rules for Semi-Continuous Data
Implements the methodology of Huling, Smith, and Chen (2020) , w ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
GEVcdn  
GEV Conditional Density Estimation Network
Implements a flexible nonlinear modelling framework for nonstationary generalized extreme value anal ...
Download / Learn more Package Citations See dependency  
binovisualfields  
Depth-Dependent Binocular Visual Fields Simulation
Simulation and visualization depth-dependent integrated visual fields. Visual fields are measured mo ...
Download / Learn more Package Citations See dependency  
fastRG  
Sample Generalized Random Dot Product Graphs in Linear Time
Samples generalized random product graphs, a generalization of a broad class of network models. Giv ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA