Other packages > Find by keyword >

GEint  

Misspecified Models for Gene-Environment Interaction
View on CRAN: Click here


Download and install GEint package within the R console
Install from CRAN:
install.packages("GEint")

Install from Github:
library("remotes")
install_github("cran/GEint")

Install by package version:
library("remotes")
install_version("GEint", "1.0")



Attach the package and use:
library("GEint")
Maintained by
Ryan Sun
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-10-01
Latest Update: 2023-03-31
Description:
The first major functionality is to compute the bias in misspecified linear gene-environment interaction models. The most generalized function for this objective is GE_bias(). However GE_bias() requires specification of many higher order moments of covariates in the model. If users are unsure about how to calculate/estimate these higher order moments, it may be easier to use GE_bias_normal_squaredmis(). This function places many more assumptions on the covariates (most notably that they are all jointly generated from a multivariate normal distribution) and is thus able to automatically calculate many of the higher order moments automatically, necessitating only that the user specify some covariances. There are also functions to solve for the bias through simulation and non-linear equation solvers, these can be used to check your work. Second major functionality is to implement the Bootstrap Inference with Correct Sandwich (BICS) testing procedure, which we have found to provide better finite-sample performance than other inference procedures for testing GxE interaction. More details on these functions are available in Sun, Carroll, Christiani, and Lin (2018) .
How to cite:
Ryan Sun (2016). GEint: Misspecified Models for Gene-Environment Interaction. R package version 1.0, https://cran.r-project.org/web/packages/GEint
Previous versions and publish date:
0.1.1 (2016-10-01 01:07), 0.1.2 (2017-01-06 23:06), 0.1.4 (2017-08-09 22:33), 0.1.5 (2019-01-15 06:20), 1.0 (2022-05-18 09:20)
Other packages that cited GEint R package
View GEint citation profile
Other R packages that GEint depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns