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FourgameteP  

FourGamete Test
View on CRAN: Click here


Download and install FourgameteP package within the R console
Install from CRAN:
install.packages("FourgameteP")

Install from Github:
library("remotes")
install_github("cran/FourgameteP")

Install by package version:
library("remotes")
install_version("FourgameteP", "0.1.0")



Attach the package and use:
library("FourgameteP")
Maintained by
Milton T Drott
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-10-08
Latest Update: 2018-10-08
Description:
The four-gamete test is based on the infinite-sites model which assumes that the probability of the same mutation occurring twice (recurrent or parallel mutations) and the probability of a mutation back to the original state (reverse mutations) are close to zero. Without these types of mutations, the only explanation for observing the four dilocus genotypes (example below) is recombination (Hudson and Kaplan 1985, Genetics 111:147-164). Thus, the presence of all four gametes is also called phylogenetic incompatibility.
How to cite:
Milton T Drott (2018). FourgameteP: FourGamete Test. R package version 0.1.0, https://cran.r-project.org/web/packages/FourgameteP
Previous versions and publish date:
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Functions, R codes and Examples using the FourgameteP R package
Some associated functions: FGf . FourgameteP . 
Some associated R codes: FGf.R . FourgameteP.R .  Full FourgameteP package functions and examples
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