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FishResp  

Analytical Tool for Aquatic Respirometry
View on CRAN: Click here


Download and install FishResp package within the R console
Install from CRAN:
install.packages("FishResp")

Install from Github:
library("remotes")
install_github("cran/FishResp")

Install by package version:
library("remotes")
install_version("FishResp", "1.1.2")



Attach the package and use:
library("FishResp")
Maintained by
Sergey Morozov
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-05-09
Latest Update:
Description:
Calculates metabolic rate of fish and other aquatic organisms measured using an intermittent-flow respirometry approach. The tool is used to run a set of graphical QC tests of raw respirometry data, correct it for background respiration and chamber effect, filter and extract target values of absolute and mass-specific metabolic rate. Experimental design should include background respiration tests and measuring of one or more metabolic rate traits. The R package is ideally integrated with the pump controller 'PumpResp' and the DO meter 'SensResp' (open-source hardware by FishResp). Raw respirometry data can be also imported from 'AquaResp' (free software), 'AutoResp' ('LoligoSystems'), 'OxyView' ('PreSens'), 'Pyro Oxygen Logger' ('PyroScience') and 'Q-box Aqua' ('QubitSystems'). More information about the R package 'FishResp'is available in the publication by Morozov et al. (2019) .
How to cite:
Sergey Morozov (2017). FishResp: Analytical Tool for Aquatic Respirometry. R package version 1.1.2, https://cran.r-project.org/web/packages/FishResp. Accessed 11 Aug. 2026.
Previous versions and publish date:
0.1.0 (2017-05-09 00:33), 0.2.0 (2018-01-04 14:45), 0.3.0 (2018-06-01 14:30), 0.4.0 (2018-08-27 15:34), 1.0.0 (2018-09-24 14:00), 1.0.1 (2018-09-26 16:20), 1.0.2 (2018-10-22 10:20), 1.0.3 (2019-03-07 14:42), 1.1.0 (2021-05-12 02:52), 1.1.1 (2022-09-18 17:06), 1.1.2 (2024-11-12 12:30), (2026-07-09 08:04)
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