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FishResp
View on CRAN: Click
here
Download and install FishResp package within the R console
Install from CRAN:
install.packages("FishResp")
Install from Github:
library("remotes")
install_github("cran/FishResp")
Install by package version:
library("remotes")
install_version("FishResp", "1.1.1")
Attach the package and use:
library("FishResp")
Maintained by
Sergey Morozov
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-05-09
Latest Update: 2022-09-18
Description:
Calculates metabolic rate of fish and other aquatic organisms measured using
an intermittent-flow respirometry approach. The tool is used to run a set of graphical
QC tests of raw respirometry data, correct it for background respiration and chamber
effect, filter and extract target values of absolute and mass-specific metabolic rate.
Experimental design should include background respiration tests and measuring of one
or more metabolic rate traits. The R package is ideally integrated with the pump
controller 'PumpResp' and the DO meter 'SensResp' (open-source hardware by FishResp).
Raw respirometry data can be also imported from 'AquaResp' (free software), 'AutoResp'
('LoligoSystems'), 'OxyView' ('PreSens'), 'Pyro Oxygen Logger' ('PyroScience') and
'Q-box Aqua' ('QubitSystems'). More information about the R package 'FishResp'is
available in the publication by Morozov et al. (2019) .
How to cite:
Sergey Morozov (2017). FishResp: Analytical Tool for Aquatic Respirometry. R package version 1.1.1, https://cran.r-project.org/web/packages/FishResp
Previous versions and publish date:
Other packages that cited FishResp R package
View FishResp citation profile
Other R packages that FishResp depends,
imports, suggests or enhances
Functions, R codes and Examples using
the FishResp R package
Some associated functions: AMR.clean . AMR . AMR.raw . AMR.slope . FishResp . QC.activity . QC.meas . QC.slope . SMR.clean . SMR . SMR.raw . SMR.slope . calculate.MR . convert.rMR . convert.respirometry . correct.meas . export.MR . extract.slope . import.meas . import.test . info . input.info . post . pre . prepare.data . presens.aquaresp . pyroscience.aquaresp . pyroscience.pumpresp . results . rm.data .
Some associated R codes: AMR.R . AMR.clean.R . AMR.raw.R . AMR.slope.R . FishResp.R . QC.activity.R . QC.meas.R . QC.slope.R . SMR.R . SMR.clean.R . SMR.raw.R . SMR.slope.R . calculate.MR.R . convert.rMR.R . convert.respirometry.R . correct.meas.R . export.MR.R . extract.slope.R . import.meas.R . import.test.R . info.R . input.info.R . post.R . pre.R . prepare.data.R . presens.aquaresp.R . pyroscience.aquaresp.R . pyroscience.pumpresp.R . results.R . rm.data.R . startup.R . Full FishResp package functions and examples
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