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FLASHMM  

Fast and Scalable Single Cell Differential Expression Analysis using Mixed-Effects Models
View on CRAN: Click here


Download and install FLASHMM package within the R console
Install from CRAN:
install.packages("FLASHMM")

Install from Github:
library("remotes")
install_github("cran/FLASHMM")

Install by package version:
library("remotes")
install_version("FLASHMM", "1.2.3")



Attach the package and use:
library("FLASHMM")
Maintained by
Changjiang Xu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-01-20
Latest Update: 2025-04-09
Description:
A fast and scalable linear mixed-effects model (LMM) estimation algorithm for analysis of single-cell differential expression. The algorithm uses summary-level statistics and requires less computer memory to fit the LMM.
How to cite:
Changjiang Xu (2025). FLASHMM: Fast and Scalable Single Cell Differential Expression Analysis using Mixed-Effects Models. R package version 1.2.3, https://cran.r-project.org/web/packages/FLASHMM. Accessed 26 Aug. 2026.
Previous versions and publish date:
1.0.0 (2025-01-14 14:20), 1.1.0 (2025-03-11 22:30), 1.2.0 (2025-03-31 19:50), 1.2.1 (2025-04-09 19:50), 1.2.2 (2025-08-19 07:40), 1.2.3 (2025-08-26 23:00), (2026-07-09 08:03)
Other packages that cited FLASHMM R package
View FLASHMM citation profile
Other R packages that FLASHMM depends, imports, suggests or enhances
Complete documentation for FLASHMM
Functions, R codes and Examples using the FLASHMM R package
Full FLASHMM package functions and examples
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