Other packages > Find by keyword >

ExpGenetic  

Non-Additive Expression Analysis of Hybrid Offspring
View on CRAN: Click here


Download and install ExpGenetic package within the R console
Install from CRAN:
install.packages("ExpGenetic")

Install from Github:
library("remotes")
install_github("cran/ExpGenetic")

Install by package version:
library("remotes")
install_version("ExpGenetic", "0.1.0")



Attach the package and use:
library("ExpGenetic")
Maintained by
Yuqing Wu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-09-09
Latest Update: 2022-09-09
Description:
Three functional modules, including genetic features, differential expression analysis and non-additive expression analysis were integrated into the package. And the package is suitable for RNA-seq and small RNA sequencing data. Besides, two methods of non-additive expression analysis were provided. One is the calculation of the additive (a) and dominant (d), the other is the evaluation of expression level dominance by comparing the total expression of the gene in hybrid offspring with the expression level in parents. For non-additive expression analysis of RNA-seq data, it is only applicable to hybrid offspring (including two sub-genomes) species for the time being.
How to cite:
Yuqing Wu (2022). ExpGenetic: Non-Additive Expression Analysis of Hybrid Offspring. R package version 0.1.0, https://cran.r-project.org/web/packages/ExpGenetic. Accessed 29 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited ExpGenetic R package
View ExpGenetic citation profile
Other R packages that ExpGenetic depends, imports, suggests or enhances
Complete documentation for ExpGenetic
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

sprintr  
Sparse Reluctant Interaction Modeling
An implementation of a computationally efficient method to fit large-scale interaction models based ...
Download / Learn more Package Citations See dependency  
Maintainer: Guo Yu (view profile)
mappoly  
Genetic Linkage Maps in Autopolyploids
Construction of genetic maps in autopolyploid full-sib populations. Uses pairwise recombination fra ...
Download / Learn more Package Citations See dependency  
ollg  
Computes some Measures of OLL-G Family of Distributions
Computes the pdf, cdf, quantile function, hazard function and generating random numbers for Odd log- ...
Download / Learn more Package Citations See dependency  
SurvDisc  
Discrete Time Survival and Longitudinal Data Analysis
Various functions for discrete time survival analysis and longitudinal analysis. SIMEX method for co ...
Download / Learn more Package Citations See dependency  
cogmapr  
Cognitive Mapping Tools Based on Coding of Textual Sources
Functions for building cognitive maps based on qualitative data. Inputs are textual sources (article ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

27,653

R Packages

236,180

Dependencies

73,487

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA