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EpiEstim  

Estimate Time Varying Reproduction Numbers from Epidemic Curves
View on CRAN: Click here


Download and install EpiEstim package within the R console
Install from CRAN:
install.packages("EpiEstim")

Install from Github:
library("remotes")
install_github("cran/EpiEstim")

Install by package version:
library("remotes")
install_version("EpiEstim", "2.2-5")



Attach the package and use:
library("EpiEstim")
Maintained by
Anne Cori
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-06-07
Latest Update: 2025-06-27
Description:
Tools to quantify transmissibility throughout an epidemic from the analysis of time series of incidence as described in Cori et al. (2013) and Wallinga and Teunis (2004) .
How to cite:
Anne Cori (2012). EpiEstim: Estimate Time Varying Reproduction Numbers from Epidemic Curves. R package version 2.2-5, https://cran.r-project.org/web/packages/EpiEstim. Accessed 03 Nov. 2026.
Previous versions and publish date:
1.0-0 (2012-06-07 15:18), 1.1-0 (2013-02-19 16:08), 1.1-1 (2013-03-01 12:58), 1.1-2 (2013-03-08 18:07), 2.2-1 (2019-07-08 18:40), 2.2-3 (2020-05-29 12:00), 2.2-4.1 (2025-06-23 08:46), 2.2-4 (2021-01-07 17:20), (2026-07-09 08:03)
Other packages that cited EpiEstim R package
View EpiEstim citation profile
Other R packages that EpiEstim depends, imports, suggests or enhances
Complete documentation for EpiEstim
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