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EmbedSOM
View on CRAN: Click
here
Download and install EmbedSOM package within the R console
Install from CRAN:
install.packages("EmbedSOM")
Install from Github:
library("remotes")
install_github("cran/EmbedSOM")
Install by package version:
library("remotes")
install_version("EmbedSOM", "2.2")
Attach the package and use:
library("EmbedSOM")
Maintained by
Mirek Kratochvil
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.EmbedSOM . https://github.com/exaexa/EmbedSOM . EmbedSOM citation info . EmbedSOM results . EmbedSOM.pdf . EmbedSOM basic embedding . EmbedSOM_2.2.tar.gz . EmbedSOM_2.2.zip . EmbedSOM_2.2.zip . EmbedSOM_2.2.zip . EmbedSOM_2.2.tgz . EmbedSOM_2.2.tgz . EmbedSOM_2.2.tgz . EmbedSOM_2.2.tgz . EmbedSOM archive . https://CRAN.R-project.org/package=EmbedSOM .
First Published: 2019-08-19
Latest Update: 2022-07-05
Description:
Provides a smooth mapping of multidimensional points into
low-dimensional space defined by a self-organizing map. Designed to work
with 'FlowSOM' and flow-cytometry use-cases. See Kratochvil et al. (2019)
.
How to cite:
Mirek Kratochvil (2019). EmbedSOM: Fast Embedding Guided by Self-Organizing Map. R package version 2.2, https://cran.r-project.org/web/packages/EmbedSOM. Accessed 06 May. 2025.
Previous versions and publish date:
Other packages that cited EmbedSOM R package
View EmbedSOM citation profile
Other R packages that EmbedSOM depends,
imports, suggests or enhances
Complete documentation for EmbedSOM
Functions, R codes and Examples using
the EmbedSOM R package
Some associated functions: ClusterPalette . EmbedSOM . ExprColors . ExpressionGradient . ExpressionPalette . GQTSOM . GraphCoords . Initialize_PCA . MSTCoords . MapDataToCodes . NormalizeColor . PlotData . PlotDefault . PlotEmbed . PlotGG . PlotId . RandomMap . SOM . UMAPCoords . UMatrixCoords . kMeansMap . kNNCoords . tSNECoords . uwotCoords .
Some associated R codes: coords.R . embed.R . som.R . utils.R . Full EmbedSOM package functions and examples
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