Other packages > Find by keyword >

EmbedSOM  

Fast Embedding Guided by Self-Organizing Map
View on CRAN: Click here


Download and install EmbedSOM package within the R console
Install from CRAN:
install.packages("EmbedSOM")

Install from Github:
library("remotes")
install_github("cran/EmbedSOM")

Install by package version:
library("remotes")
install_version("EmbedSOM", "2.1.2")



Attach the package and use:
library("EmbedSOM")
Maintained by
Mirek Kratochvil
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-19
Latest Update: 2022-07-05
Description:
Provides a smooth mapping of multidimensional points into low-dimensional space defined by a self-organizing map. Designed to work with 'FlowSOM' and flow-cytometry use-cases. See Kratochvil et al. (2019) .
How to cite:
Mirek Kratochvil (2019). EmbedSOM: Fast Embedding Guided by Self-Organizing Map. R package version 2.1.2, https://cran.r-project.org/web/packages/EmbedSOM. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.9.1 (2019-08-19 20:00), 1.9 (2019-08-19 11:50), 2.1.1 (2020-02-12 13:20)
Other packages that cited EmbedSOM R package
View EmbedSOM citation profile
Other R packages that EmbedSOM depends, imports, suggests or enhances
Complete documentation for EmbedSOM
Functions, R codes and Examples using the EmbedSOM R package
Some associated functions: ClusterPalette . EmbedSOM . ExprColors . ExpressionGradient . ExpressionPalette . GQTSOM . GraphCoords . Initialize_PCA . MSTCoords . MapDataToCodes . NormalizeColor . PlotData . PlotDefault . PlotEmbed . PlotGG . PlotId . RandomMap . SOM . UMAPCoords . UMatrixCoords . kMeansMap . kNNCoords . tSNECoords . uwotCoords . 
Some associated R codes: coords.R . embed.R . som.R . utils.R .  Full EmbedSOM package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
composits  
Compositional, Multivariate and Univariate Time Series Outlier Ensemble
A compositional multivariate and univariate time series outlier ensemble.It uses the four R packages ...
Download / Learn more Package Citations See dependency  
tropAlgebra  
Tropical Algebraic Functions
It includes functions like tropical addition, tropical multiplication for vectors and matrices. In t ...
Download / Learn more Package Citations See dependency  
elect  
Estimation of Life Expectancies Using Multi-State Models
Functions to compute state-specific and marginal life expectancies. The computation is based on a fi ...
Download / Learn more Package Citations See dependency  
dmlalg  
Double Machine Learning Algorithms
Implementation of double machine learning (DML) algorithms in R, based on Emmenegger and Buehlmann ...
Download / Learn more Package Citations See dependency  
Rfast2  
A Collection of Efficient and Extremely Fast R Functions II
A collection of fast statistical and utility functions for data analysis. Functions for regression, ...
Download / Learn more Package Citations See dependency  

23,394

R Packages

201,798

Dependencies

63,416

Author Associations

23,395

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA