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EcoDiet
View on CRAN: Click
here
Download and install EcoDiet package within the R console
Install from CRAN:
install.packages("EcoDiet")
Install from Github:
library("remotes")
install_github("cran/EcoDiet")
Install by package version:
library("remotes")
install_version("EcoDiet", "2.0.1")
Attach the package and use:
library("EcoDiet")
Maintained by
Pierre-Yves Hernvann
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.EcoDiet . https://github.com/pyhernvann/EcoDiet/issues . https://github.com/pyhernvann/EcoDiet . EcoDiet citation info . EcoDiet results . EcoDiet.pdf . 1. Introduction - How to use EcoDiet . 2. EcoDiet explored on a realistic example . EcoDiet_2.0.1.tar.gz . EcoDiet_2.0.1.zip . EcoDiet_2.0.1.zip . EcoDiet_2.0.1.zip . EcoDiet_2.0.1.tgz . EcoDiet_2.0.1.tgz . EcoDiet_2.0.1.tgz . EcoDiet_2.0.1.tgz . EcoDiet_2.0.1.tgz . EcoDiet_2.0.1.tgz . EcoDiet archive . https://CRAN.R-project.org/package=EcoDiet .
First Published: 2020-03-05
Latest Update: 2023-01-06
Description:
Biotracers and stomach content analyses are combined in a Bayesian hierarchical model
to estimate a probabilistic topology matrix (all trophic link probabilities) and a diet matrix
(all diet proportions).
The package relies on the JAGS software and the 'jagsUI' package to run a Markov chain Monte Carlo
approximation of the different variables.
How to cite:
Pierre-Yves Hernvann (2020). EcoDiet: Estimating a Diet Matrix from Biotracer and Stomach Content Data. R package version 2.0.1, https://cran.r-project.org/web/packages/EcoDiet. Accessed 04 Mar. 2025.
Previous versions and publish date:
Other packages that cited EcoDiet R package
View EcoDiet citation profile
Other R packages that EcoDiet depends,
imports, suggests or enhances
Complete documentation for EcoDiet
Functions, R codes and Examples using
the EcoDiet R package
Some associated functions: EcoDiet-package . diagnose_model . example_biotracer_data . example_literature_diets . example_stomach_data . mcmc_output_example . plot_data . plot_prior . plot_results . preprocess_data . realistic_biotracer_data . realistic_literature_diets . realistic_stomach_data . run_model . write_model .
Some associated R codes: EcoDiet.R . data.R . diagnose_model.R . plot.R . preprocess_data.R . run_model.R . write_model.R . Full EcoDiet package functions and examples
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