Other packages > Find by keyword >

Eagle  

Multiple Locus Association Mapping on a Genome-Wide Scale
View on CRAN: Click here


Download and install Eagle package within the R console
Install from CRAN:
install.packages("Eagle")

Install from Github:
library("remotes")
install_github("cran/Eagle")

Install by package version:
library("remotes")
install_version("Eagle", "2.5")



Attach the package and use:
library("Eagle")
Maintained by
Andrew George
[Scholar Profile | Author Map]
First Published: 2017-08-28
Latest Update: 2021-11-30
Description:
An implementation of multiple-locus association mapping on a genome-wide scale. 'Eagle' can handle inbred and outbred study populations, populations of arbitrary unknown complexity, and data larger than the memory capacity of the computer. Since 'Eagle' is based on linear mixed models, it is best suited to the analysis of data on continuous traits. However, it can tolerate non-normal data. 'Eagle' reports, as its findings, the best set of snp in strongest association with a trait. For users unfamiliar with R, to perform an analysis, run 'OpenGUI()'. This opens a web browser to the menu-driven user interface for the input of data, and for performing genome-wide analysis.
How to cite:
Andrew George (2017). Eagle: Multiple Locus Association Mapping on a Genome-Wide Scale. R package version 2.5, https://cran.r-project.org/web/packages/Eagle. Accessed 01 May. 2025.
Previous versions and publish date:
1.0.2 (2017-08-28 15:06), 1.1.0 (2018-08-22 10:00), 1.2.0 (2018-12-17 22:40), 1.3.0 (2019-01-31 09:53), 1.4.0 (2019-04-23 12:00), 1.5.0 (2019-05-17 09:20), 1.5.1 (2019-05-24 06:40), 1.5.2 (2019-08-22 06:20), 2.0.0 (2019-11-07 06:40), 2.1.0 (2019-11-14 07:20), 2.1.1 (2019-11-17 23:10), 2.2 (2020-03-03 06:20), 2.3 (2020-07-22 08:32), 2.4.1 (2020-10-19 06:30), 2.4.2 (2020-12-06 07:20), 2.4.3 (2021-01-12 08:40), 2.4.4 (2021-04-22 06:30), 2.4.5 (2021-06-10 09:00), 2.4 (2020-08-26 19:10)
Other packages that cited Eagle R package
View Eagle citation profile
Other R packages that Eagle depends, imports, suggests or enhances
Complete documentation for Eagle
Downloads during the last 30 days
04/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/29Downloads for Eagle010203040506070TrendBars

Today's Hot Picks in Authors and Packages

dCUR  
Dimension Reduction with Dynamic CUR
Dynamic CUR (dCUR) boosts the CUR decomposition (Mahoney MW., Drineas P. (2009) ...
Download / Learn more Package Citations See dependency  
dsm  
Density Surface Modelling of Distance Sampling Data
Density surface modelling of line transect data. A Generalized Additive Model-based approach is use ...
Download / Learn more Package Citations See dependency  
representr  
Create Representative Records After Entity Resolution
An implementation of Kaplan, Betancourt, Steorts (2022) that cre ...
Download / Learn more Package Citations See dependency  
geofabrik  
Downloading Open Street Map Data
Download OpenStreetMap data from geofabrik servers httpsdownload.geofabrik.de. This approach usesonl ...
Download / Learn more Package Citations See dependency  
pander  
An R 'Pandoc' Writer
Contains some functions catching all messages, 'stdout' and other useful information while evaluati ...
Download / Learn more Package Citations See dependency  
fbar  
An Extensible Approach to Flux Balance Analysis
A toolkit for Flux Balance Analysis and related metabolic modeling techniques. Functions are provid ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,176

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA