R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
DiPhiSeq
View on CRAN: Click
here
Download and install DiPhiSeq package within the R console
Install from CRAN:
install.packages("DiPhiSeq")
Install from Github:
library("remotes")
install_github("cran/DiPhiSeq") Install by package version:
library("remotes")
install_version("DiPhiSeq", "0.2.0") Attach the package and use:
library("DiPhiSeq")
Maintained by
Jun Li
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-14
Latest Update: 2018-10-24
Description:
Implements the algorithm described in Jun Li and Alicia T. Lamere,
"DiPhiSeq: Robust comparison of expression levels on RNA-Seq data with large sample sizes" (Unpublished).
Detects not only genes that show different
average expressions ("differential expression", DE), but also genes that show different
diversities of expressions in different groups ("differentially dispersed", DD). DD genes
can be important clinical markers. 'DiPhiSeq' uses a redescending penalty on the
quasi-likelihood function, and thus has superior robustness against outliers and other noise.
Updates from version 0.1.0: (1) Added the option of using adaptive initial value for phi.
(2) Added a function for estimating the proportion of outliers in the data.
(3) Modified the input parameter names for clarity, and modified the output format for the main function.
How to cite:
Jun Li (2018). DiPhiSeq: Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data. R package version 0.2.0, https://cran.r-project.org/web/packages/DiPhiSeq. Accessed 05 Aug. 2026.
Previous versions and publish date:
0.1.0 (2018-06-14 21:00), (2026-07-09 08:02)
Other packages that cited DiPhiSeq R package
View DiPhiSeq citation profile
Other R packages that DiPhiSeq depends,
imports, suggests or enhances
Complete documentation for DiPhiSeq
Functions, R codes and Examples using
the DiPhiSeq R package
Some associated functions: diphiseq . example_data . outprop . robnb . robtest .
Some associated R codes: data.R . diphiseq.R . robstat.R . robtest.R . Full DiPhiSeq package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
noisyr
Quantifies and removes technical noise from high-throughput
sequencing data. Two approaches are use ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Ilias Moutsopoulos (view profile)
kernelPSI
Different post-selection inference strategies for kernelselection as described in kernelPSI a Post-S ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Lotfi Slim (view profile)
quickcode
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
dcov
Efficient methods for computing distance covariance and relevant statistics. See Sz ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Hang Weiqiang (view profile)
dhReg
Building and forecasting time series data with multiple seasonality using Dynamic Harmonic Regressio ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Pranay Gaikwad (view profile)
28,083
R Packages
239,283
Dependencies
74,457
Author Associations
28,084
Publication Badges
