Other packages > Find by keyword >

DamageDetective  

Detecting Damaged Cells in Single-Cell RNA Sequencing Data
View on CRAN: Click here


Download and install DamageDetective package within the R console
Install from CRAN:
install.packages("DamageDetective")

Install from Github:
library("remotes")
install_github("cran/DamageDetective")

Install by package version:
library("remotes")
install_version("DamageDetective", "1.0.0")



Attach the package and use:
library("DamageDetective")
Maintained by
Alicen Henning
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-03
Latest Update: 2025-04-03
Description:
Detects and filters damaged cells in single-cell RNA sequencing (scRNA-seq) data using a novel approach inspired by 'DoubletFinder'. Damage is detected by measuring the extent to which cells deviate from artificially damaged profiles of themselves, simulated through the probabilistic escape of cytoplasmic RNA. As output, a damage score ranging from 0 to 1 is given for each cell providing an intuitive scale for filtering that is standardised across cell types, samples, and experiments.
How to cite:
Alicen Henning (2025). DamageDetective: Detecting Damaged Cells in Single-Cell RNA Sequencing Data. R package version 1.0.0, https://cran.r-project.org/web/packages/DamageDetective. Accessed 02 Sep. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited DamageDetective R package
View DamageDetective citation profile
Other R packages that DamageDetective depends, imports, suggests or enhances
Complete documentation for DamageDetective
Functions, R codes and Examples using the DamageDetective R package
Full DamageDetective package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

VIM  
Visualization and Imputation of Missing Values
New tools for the visualization of missing and/or imputed values are introduced, which can be used f ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
recmap  
Compute the Rectangular Statistical Cartogram
Implements the RecMap MP2 construction heuristic . This algorithm draw ...
Download / Learn more Package Citations See dependency  
ggsci  
Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
A collection of 'ggplot2' color palettes inspired by plots in scientific journals, data visualizati ...
Download / Learn more Package Citations See dependency  
multicmp  
Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
A toolkit containing statistical analysis models motivated by multivariate forms of the Conway-Maxwe ...
Download / Learn more Package Citations See dependency  

28,437

R Packages

239,283

Dependencies

75,283

Author Associations

28,438

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA