Other packages > Find by keyword >

DamageDetective  

Detecting Damaged Cells in Single-Cell RNA Sequencing Data
View on CRAN: Click here


Download and install DamageDetective package within the R console
Install from CRAN:
install.packages("DamageDetective")

Install from Github:
library("remotes")
install_github("cran/DamageDetective")

Install by package version:
library("remotes")
install_version("DamageDetective", "1.0.0")



Attach the package and use:
library("DamageDetective")
Maintained by
Alicen Henning
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-03
Latest Update: 2025-04-03
Description:
Detects and filters damaged cells in single-cell RNA sequencing (scRNA-seq) data using a novel approach inspired by 'DoubletFinder'. Damage is detected by measuring the extent to which cells deviate from artificially damaged profiles of themselves, simulated through the probabilistic escape of cytoplasmic RNA. As output, a damage score ranging from 0 to 1 is given for each cell providing an intuitive scale for filtering that is standardised across cell types, samples, and experiments.
How to cite:
Alicen Henning (2025). DamageDetective: Detecting Damaged Cells in Single-Cell RNA Sequencing Data. R package version 1.0.0, https://cran.r-project.org/web/packages/DamageDetective. Accessed 22 Sep. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited DamageDetective R package
View DamageDetective citation profile
Other R packages that DamageDetective depends, imports, suggests or enhances
Complete documentation for DamageDetective
Functions, R codes and Examples using the DamageDetective R package
Full DamageDetective package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

odns  
Access Scottish Health and Social Care Open Data
Allows potential users of Scottish Health and Social Care Open Data ( ...
Download / Learn more Package Citations See dependency  
Countr  
Flexible Univariate Count Models Based on Renewal Processes
Flexible univariate count models based on renewal processes. The models may include covariates and ...
Download / Learn more Package Citations See dependency  
heatmaply  
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Create interactive cluster 'heatmaps' that can be saved as a stand- alone HTML file, embedded in 'R ...
Download / Learn more Package Citations See dependency  
cnum  
Chinese Numerals Processing
Chinese numerals processing in R, such as conversion between Chinese numerals and Arabic numerals a ...
Download / Learn more Package Citations See dependency  
jointseg  
Joint Segmentation of Multivariate (Copy Number) Signals
Methods for fast segmentation of multivariate signals into piecewise constant profiles and for gene ...
Download / Learn more Package Citations See dependency  
spider  
Species Identity and Evolution in R
Analysis of species limits and DNA barcoding data. Included are functions for generating important s ...
Download / Learn more Package Citations See dependency  

28,720

R Packages

247,686

Dependencies

75,677

Author Associations

28,721

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA