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DSAIDE  

Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution)
View on CRAN: Click here


Download and install DSAIDE package within the R console
Install from CRAN:
install.packages("DSAIDE")

Install from Github:
library("remotes")
install_github("cran/DSAIDE")

Install by package version:
library("remotes")
install_version("DSAIDE", "0.9.6")



Attach the package and use:
library("DSAIDE")
Maintained by
Andreas Handel
[Scholar Profile | Author Map]
First Published: 2017-03-02
Latest Update: 2023-08-23
Description:
Exploration of simulation models (apps) of various infectious disease transmission dynamics scenarios. The purpose of the package is to help individuals learn about infectious disease epidemiology (ecology/evolution) from a dynamical systems perspective. All apps include explanations of the underlying models and instructions on what to do with the models.
How to cite:
Andreas Handel (2017). DSAIDE: Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution). R package version 0.9.6, https://cran.r-project.org/web/packages/DSAIDE. Accessed 29 Mar. 2025.
Previous versions and publish date:
0.4.0 (2017-03-02 08:09), 0.5.0 (2017-08-07 14:35), 0.6.0 (2017-09-30 23:41), 0.7.0 (2018-08-07 01:00), 0.8.0 (2019-03-30 08:50), 0.8.2 (2019-07-04 18:00), 0.8.3 (2020-01-09 01:20), 0.9.0 (2021-02-02 06:20), 0.9.1 (2021-03-22 22:50), 0.9.3 (2021-07-23 20:20)
Other packages that cited DSAIDE R package
View DSAIDE citation profile
Other R packages that DSAIDE depends, imports, suggests or enhances
Complete documentation for DSAIDE
Functions, R codes and Examples using the DSAIDE R package
Some associated functions: DSAIDE . dsaidemenu . flu1918data . generate_documentation . generate_fctcall . generate_ggplot . generate_plotly . generate_shinyinput . generate_text . norodata . run_model . simulate_Characteristics_of_ID_ode . simulate_Complex_ID_Control_ode . simulate_Drug_Resistance_Evolution_stochastic . simulate_Environmental_Transmission_model_ode . simulate_Host_Heterogeneity_Model_ode . simulate_SEIRSd_model_stochastic . simulate_SIRSd_model_ode . simulate_SIRSd_model_stochastic . simulate_SIR_model_discrete . simulate_SIR_model_ode . simulate_SIR_modelexploration . simulate_SIR_usanalysis . simulate_Vector_transmission_model_ode . simulate_directtransmission_ode . simulate_flu_fit . simulate_idcontrolmultigroup_ode . simulate_idcontrolmultioutbreak_ode . simulate_idpatterns_ode . simulate_idsurveillance_ode . simulate_idvaccine_ode . simulate_multipathogen_ode . simulate_noro_fit . 
Some associated R codes: DSAIDE.R . data.R . dsaidemenu.R . generate_documentation.R . generate_fctcall.R . generate_ggplot.R . generate_plotly.R . generate_shinyinput.R . generate_text.R . run_model.R . simulate_Characteristics_of_ID_ode.R . simulate_Complex_ID_Control_ode.R . simulate_Drug_Resistance_Evolution_stochastic.R . simulate_Environmental_Transmission_model_ode.R . simulate_Host_Heterogeneity_Model_ode.R . simulate_SEIRSd_model_stochastic.R . simulate_SIRSd_model_ode.R . simulate_SIRSd_model_stochastic.R . simulate_SIR_model_discrete.R . simulate_SIR_model_ode.R . simulate_SIR_modelexploration.R . simulate_SIR_usanalysis.R . simulate_Vector_transmission_model_ode.R . simulate_directtransmission_ode.R . simulate_flu_fit.R . simulate_idcontrolmultigroup_ode.R . simulate_idcontrolmultioutbreak_ode.R . simulate_idpatterns_ode.R . simulate_idsurveillance_ode.R . simulate_idvaccine_ode.R . simulate_multipathogen_ode.R . simulate_noro_fit.R .  Full DSAIDE package functions and examples
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