R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
DGCA
View on CRAN: Click
here
Download and install DGCA package within the R console
Install from CRAN:
install.packages("DGCA")
Install from Github:
library("remotes")
install_github("cran/DGCA")
Install by package version:
library("remotes")
install_version("DGCA", "1.0.3")
Attach the package and use:
library("DGCA")
Maintained by
Andrew McKenzie
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
First Published: 2016-11-17
Latest Update: 2023-03-15
Description:
Performs differential correlation analysis on input
matrices, with multiple conditions specified by a design matrix. Contains
functions to filter, process, save, visualize, and interpret differential
correlations of identifier-pairs across the entire identifier space, or with
respect to a particular set of identifiers (e.g., one). Also contains several
functions to perform differential correlation analysis on clusters (i.e., modules)
or genes. Finally, it contains functions to generate empirical p-values for the
hypothesis tests and adjust them for multiple comparisons. Although the package
was built with gene expression data in mind, it is applicable to other types of
genomics data as well, in addition to being potentially applicable to data from
other fields entirely. It is described more fully in the manuscript
introducing it, freely available at .
How to cite:
Andrew McKenzie (2016). DGCA: Differential Gene Correlation Analysis. R package version 1.0.3, https://cran.r-project.org/web/packages/DGCA. Accessed 28 Mar. 2025.
Previous versions and publish date:
Other packages that cited DGCA R package
View DGCA citation profile
Other R packages that DGCA depends,
imports, suggests or enhances
Functions, R codes and Examples using
the DGCA R package
Some associated functions: DGCA . adjustPVals . ages_darmanis . bigEmpPVals . corMats-class . dCorAvg . dCorClass . dCorMats . dCorrs . darmanis . dcPair-class . dcTopPairs . ddMEGENA . ddcorAll . ddcorFindSignificant . ddcorGO . ddplot . design_mat . extractModuleGO . filterGenes . findGOTermEnrichment . getCors . getDCorPerm . getDCors . getGroupsFromDesign . makeDesign . matCorSig . matCorr . matNSamp . moduleDC . moduleGO . pairwiseDCor . permQValue . plotCors . plotGOOneGroup . plotGOTwoGroups . plotModuleGO . plotVals . switchGenesToHGCN . topDCGenes .
Some associated R codes: adjustPVals.R . bigEmpPVals.R . dCor.R . dCorAvg.R . dCorClass.R . dCorMats.R . dcTopPairs.R . ddMEGENA.R . ddcorAll.R . ddcorClasses.R . ddcorGO.R . ddplot.R . designMats.R . dgca_package.R . filterGenes.R . getCors.R . getDCorPerm.R . getDCors.R . makeDesign.R . matCorSig.R . matCorr.R . matNSamp.R . moduleDC.R . moduleGO.R . pairwiseDCor.R . permQValue.R . plotCors.R . plotGOOnegroup.R . plotGOTwoGroups.R . plotVals.R . topDCGenes.R . Full DGCA package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
gripp
Set of functions designed to solve inverse problems. The direct problem is used to calculate a cost ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jader Lugon Junior (view profile)
pleiotest
It performs a fast multi-trait genome-wide association analysis based on seemingly unrelated regress ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Fernando Aguate (view profile)
transfR
A geomorphology-based hydrological modelling for transferring streamflow measurements from gauged to ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Alban de Lavenne (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
hts
Provides methods for analysing and forecasting hierarchical and
grouped time series. The available ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Earo Wang (view profile)
spinifex
Data visualization tours animates linear projection of multivariate data as its basis (ie. orientat ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Nicholas Spyrison (view profile)
23,842
R Packages
207,311
Dependencies
64,420
Author Associations
23,781
Publication Badges
